Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1226 ATGCCAGACACAATATGTAAAGGTTCAAGCCAAGTGATCTTAAACACCGATATTCATATCCCAGATATTGGGGTTGCTGAGAATAAGCCGATCTTTTCGCCGGAGATGGGGAAGAAAGGAGGCGGATGGTTCTCGTCGATGAAAAGAGTTTTCAAATCGTCCTCTAAGGACTCGTCGGCTCCGACGAAGAAGAAGGACTATGCAGAGAAAAGGCAGCCTGAAGTGCCAGAGGTGGTGTCTTTTCAGCATTTTCCTCCAGAGAGTTCTCCTGATGTCACCAATGACAATAGTATCACATCCATGCCAGTGACTGAAGATAGAAACCATGCCCTTGCCGTGGCAGCGGCCACTGCTGCGGCTGCTGAAGCTGCGGTTGCTGCTGCTCAAGCGGCAGCAAGAGTGGTTCGACTGGCAGGTTATGGACGCCACTCTAAGGAAGAAAGGGCAGCTACCCTTATTCAATCACACTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGGCACAATGTGCGGAAGCAAGCACAAATGACAATGCGCTGTATGCAAGCATTAGTTCGAGTACAGGCAAGAGTAAGAGCTCGCAGATTCCAGTTGACCCAGGAGAAGCTTCAGAAGAGAGTGGAAGAGTACGAGGAGAGAGAATTTGAGGAACAAGAGCCAAAGCCTATGAGCCCCATAAGAAGGACTGACATGGATAGGTGGGAAAACAGGCGTCAAAGTAGCCAGAAAATGAAGGAAAATGATCTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGAGCACTTGCTTACGCTTTCAATTATCAGCAACAACAGAAGCAATATCCACAGACAGACCCGAATGTTGATGATGTTGGAACATATACCAATGAGCGAGAAAAGGCCCAGTGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACATCCACACAATGTTAGGCACGTGGGGCCACGTGAGACCCCATACATGACCCTTGCCACTGCAACCACTACCACTACAGATGACATGTCTGAAAAGACAGTGGAAATGGACATGGTGGCTCCTCTTGGCTCAAGCAACTTCAACGCTATGGGATTAATGAACCAAGAGTTTCTTGATTCAAGCCCAAGTTCCAACGGAAAACACCAGCGACAACTCAGTGGTAATGTACCTAGCTACATGGCTCCTACCCAGTCTGCAAAGGCCAAGGTGCGAGGTCAAGGCCCGGTCAAGCCACATGGCTCACCTGGGCCTCAGTGGAACTCATCCACAAAGAGAGGGCCTGGTATTGGGTCAGGCTGTGACTCCTCAAGCTCTGCAGGAGGAGCGTCAAATTACAAGTTTCCGAAGAGCCCAAGCCCAAAAATTAATGGGACTCGCCCACAGTCTAGGCGGATTCCAGGTGGCAGCCCAGATTACGTTGGCATTGAGGATTGGTCCCTCCCTCTTGGAGCCCATGGGTGGGCATGA 1494 0.504 MPDTICKGSSQVILNTDIHIPDIGVAENKPIFSPEMGKKGGGWFSSMKRVFKSSSKDSSAPTKKKDYAEKRQPEVPEVVSFQHFPPESSPDVTNDNSITSMPVTEDRNHALAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHSKEERAATLIQSHYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRFQLTQEKLQKRVEEYEEREFEEQEPKPMSPIRRTDMDRWENRRQSSQKMKENDLRKHEAAMKRERALAYAFNYQQQQKQYPQTDPNVDDVGTYTNEREKAQWGWNWLERWMSSHPHNVRHVGPRETPYMTLATATTTTTDDMSEKTVEMDMVAPLGSSNFNAMGLMNQEFLDSSPSSNGKHQRQLSGNVPSYMAPTQSAKAKVRGQGPVKPHGSPGPQWNSSTKRGPGIGSGCDSSSSAGGASNYKFPKSPSPKINGTRPQSRRIPGGSPDYVGIEDWSLPLGAHGWA 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1226 497 ProSiteProfiles IQ motif profile. 146 174 IPR000048 GO:0005515
Dere04g1226 497 SMART iq_5 145 167 IPR000048 GO:0005515
Dere04g1226 497 SMART iq_5 168 189 IPR000048 GO:0005515
Dere04g1226 497 MobiDBLite consensus disorder prediction 424 472 - -
Dere04g1226 497 Pfam Protein of unknown function (DUF4005) 383 417 IPR025064 -
Dere04g1226 497 Pfam IQ calmodulin-binding motif 147 167 IPR000048 GO:0005515
Dere04g1226 497 Pfam IQ calmodulin-binding motif 173 188 IPR000048 GO:0005515
Dere04g1226 497 Coils Coil 207 227 - -
Dere04g1226 497 MobiDBLite consensus disorder prediction 378 486 - -
Dere04g1226 497 MobiDBLite consensus disorder prediction 54 99 - -
Dere04g1226 497 ProSiteProfiles IQ motif profile. 170 197 IPR000048 GO:0005515
Dere04g1226 497 Gene3D - 143 197 - -
Dere04g1226 497 MobiDBLite consensus disorder prediction 58 73 - -
Dere04g1226 497 MobiDBLite consensus disorder prediction 378 404 - -
Dere04g1226 497 PANTHER IQ-DOMAIN 5-RELATED 36 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1226 Dere-ChrDere04 13743930 13747215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1226 36 487 IQD Protein Family AT3G49260 50.206 5.84e-111 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1226 04 13743930 13747215 Dere04g1226 04 13743930 13747215 ECH