Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1214 ATGTATGCAGCGACTGGCCTTCTGTTCCCATATTTCCAGAATTTCTCTCATGAGCTTCAACAACTCGACGAGTACTGCAACACCCAGAAGCCCAATGCTTCAATGAGTGACCCTGCTCAGTCTTCTGCCATGTCAGAGTATTATGATTTGGCGGCAGAGGGAGATCTGTTCAAAGCTCCTGAGCCTATAATTGAAGATCCAATCATAGACTTGGATCCCATGACAGCAGACATTTCAATGATATCTTGTGGGGAAGACATTGTCTCCTCGCAAGGACTAAAGCCCACAGACGCTCTTCAAAATGAACAGCTTCTGAGCGAGGTATTCTATGAATGCAAAAAGGATATGTTACAAAAGGAAGCCATTGAGTCACCACTGTCTGAGATTCTGGAAATCAAGGTTCCTCTTCTGAATACAGATGAAAACCAAATTCAAGAAAACAAACCATTTACTGGTATGCCATTACCAAAAAGTGTGAGTTCAGGATGCTTGAGCTCAATGGACTGGATTCAAGGAACTGCTATGAGGCCTGCTTTTCTTGATTTCCCAGGAATTGATTTCAGTGCAGATTATGGCATGCGGAGGGCATTTAGCGAAGGAGATATAAAGGCTCTTGGTAGTGGTAATATACATGTCATCCAATCTCCCCGAGAGAGGCCCTTTCTTATCAGTAACTGTACCAGTGAGGAACGCCGAGAAAAGCTTTCCAGATATAGGAATAAGAAGACGAAGAGAAATTTTGGCCGGAAAATCAAGTACGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCAAAAACTGAAGAATGTGATGTCCGGAGGCATTGA 846 0.4385 MYAATGLLFPYFQNFSHELQQLDEYCNTQKPNASMSDPAQSSAMSEYYDLAAEGDLFKAPEPIIEDPIIDLDPMTADISMISCGEDIVSSQGLKPTDALQNEQLLSEVFYECKKDMLQKEAIESPLSEILEIKVPLLNTDENQIQENKPFTGMPLPKSVSSGCLSSMDWIQGTAMRPAFLDFPGIDFSADYGMRRAFSEGDIKALGSGNIHVIQSPRERPFLISNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEECDVRRH 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1214 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Dere04g1214 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
Dere04g1214 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 57 274 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1214 Dere-ChrDere04 13556019 13558947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1214 214 272 C2C2-CO-like Transcription Factor Family AT3G21880 45.763 1.69e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere04g1214 CCT 7.4e-17 CL0281