Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1205 ATGCCCCCTCGAGCCATTGGGTGCTCCTCCAATTATACAATAATGGCTAAATTCAAGAGAAAAGGAAACATAACGTTTGGAACTGTTCACCAAAAAGCAAACTCATTCTTCTCACGTGTTTTCTTTTCTTCTCTTTATTCTCATTGGATTGAGAATGGGTACCTCTCTGAGCCGCTTCCTCTCATCAGTGTCGAATCTCTCGACTGCCAATCATGTCTTCGCTGCACCATATACCACCCACCCACTCCTTCTACTTCTGCCTCAGTGACGCGCTTCATTTGCTCCGCAACCCTCAACAACCCTGTGAAGGAACAAGCCGAGGCATCCAAAGAGAATCTCACTATTGATGATACGCGAAGCCAAGAGGAGGAGCAGGAGGAAGACGAGGACGAGGACGTGAATAAAGAGACCGGCGAGGTCGGTGGGCCCAAAGGACCCGAACCCATCAGACTCATGCGTCCCTCTGCAATCCCGGGAAGGTATAGTTGGGGAGGTGAGAGGGGTAGCACAGACACATGCTTAGACGCCGTTTGCCAGAACAACAACCTGGTAATCCGATTCCCGTTCCCAATACAGAGACAACAACCACAATCATGTGGTTATCCAGGTTTTACAGTATCCTGCAGTAATGAAGGCCAAACATTTCTGAAACTCCCTTCCTCTGGAGGAGAATTCAGTATCCAAGCAATAGACTATGCCTCACAAGAACTATGGATCAATGATCCCCAAAACTGCCTCCCTAGACGCATACTATCCCTAAACCTCTCTGGATCCCCATTTAGTGTCGTTTATTATCAAGATTTCGCATTCTTCAAGTGTTCCTTGGAGTATCTCAAGTATCGGTATACCCCAATAGTTTGTCTTAGTGATTCGAACTACGTAGTTTTCGCTACATCTTCCAGAACGGTGTTCGTGCACTTGTCGGCGGTTTGCAGTTTGGTTAAAACTGTAAGGGTCCCAGTTTAG 966 0.471 MPPRAIGCSSNYTIMAKFKRKGNITFGTVHQKANSFFSRVFFSSLYSHWIENGYLSEPLPLISVESLDCQSCLRCTIYHPPTPSTSASVTRFICSATLNNPVKEQAEASKENLTIDDTRSQEEEQEEDEDEDVNKETGEVGGPKGPEPIRLMRPSAIPGRYSWGGERGSTDTCLDAVCQNNNLVIRFPFPIQRQQPQSCGYPGFTVSCSNEGQTFLKLPSSGGEFSIQAIDYASQELWINDPQNCLPRRILSLNLSGSPFSVVYYQDFAFFKCSLEYLKYRYTPIVCLSDSNYVVFATSSRTVFVHLSAVCSLVKTVRVPV 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1205 321 MobiDBLite consensus disorder prediction 105 155 - -
Dere04g1205 321 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 171 321 IPR046948 -
Dere04g1205 321 MobiDBLite consensus disorder prediction 120 135 - -
Dere04g1205 321 Pfam Protein of unknown function (DUF1674) 119 150 IPR012875 -
Dere04g1205 321 Pfam Wall-associated receptor kinase galacturonan-binding 173 241 IPR025287 GO:0030247
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g1205 Dere-ChrDere04 13480686 13483349 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1205 173 321 C3H Transcription Factor Family AT2G46495 38.667 2.10e-29 113