Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1200 ATGGAAACTTCAATTGTAAACTCCCACTTGTGCATCTGGTTGTTGCTAATTGTTGGGTTTGCAGAGCATGTGAGAAGTAGGAATGGCTGTTCACTTGCTGAAACACCCTGTGGATCCCTTCCTGTCCGGTTCCCTTTCCGAATAATAGAACGCCAACCAGAAGAGTGTGGGTATCCTGGGTTTGATTTACAATGCTCCCCCTCTAGTCCTACTCTTCTTCAGCTCCCTCGCTCTGTCAAGCTCTATGTCAAAAATATTGACTACAGATCTCAAACCATTGACTTATATGATCCATCTCGCTGCCTTTCTAGGCAGCCTGTGAACCTCAGTATCTCTGCTTCCCCTTTCCAATTCATGCCCGAACCTTCTAATCTTGGTGAATATACCTTCTTCAATTGCTCATCAAAAAATATAGATCTCAACTTCAGAGTTCCATGTCTAAGCAGCTCTACCCATCAAGTACTTGCCATATGGTCTGGCACAGATATCGAATCAGTTCCACTGTCGTTTTGCACCAAAATAACTACCCCTTCATCTCTTCCGTATGATTTTTCTAAGAAGGATTTCATTCTTCATTTGATGTGGTCTGACCCAATGTGCAAACATTGCGAATCAAAAAGAAAAAGATGTGGATTGAAGAATAATAGTACCAGTAATGAAACGGAATGTTTCGGAGATCACACAGGATCATCAACCAAATTAATCATTCCAGGTTAG 717 0.4184 METSIVNSHLCIWLLLIVGFAEHVRSRNGCSLAETPCGSLPVRFPFRIIERQPEECGYPGFDLQCSPSSPTLLQLPRSVKLYVKNIDYRSQTIDLYDPSRCLSRQPVNLSISASPFQFMPEPSNLGEYTFFNCSSKNIDLNFRVPCLSSSTHQVLAIWSGTDIESVPLSFCTKITTPSSLPYDFSKKDFILHLMWSDPMCKHCESKRKRCGLKNNSTSNETECFGDHTGSSTKLIIPG 238
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1200 238 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 13 230 IPR046948 -
Dere04g1200 238 Pfam Wall-associated receptor kinase galacturonan-binding 35 97 IPR025287 GO:0030247
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g1200 Dere-ChrDere04 13402336 13403270 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1200 23 224 C3H Transcription Factor Family AT2G46495 36.986 1.01e-30 114