Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1196 ATGTGTTATCCTGAATCTTGCTGGTTGTTGCTGATGATCACGTGGTCCAAACCAGATTGTAGTGAGTGTGAAGCCAAACGCAAATTATGTCAACTGGACAACAATGGTGCTGAAGATGCTATCCAATGTTATGACCACCCACCCAAACCTATTAGTGAGATAGGTTATGCTGCTATGGATCATTTCAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCAGTGTTCAAGGGTAAGCTCTCTAATGAAATTTTAGTTGCTGTGAAGATGCTCAATAACGCAGACGGAGATATGACAGAGTTCATTAATGAAGTACGAACCATGGCAAAAATCCATCACGTCAATGTGGCTCGCATGCTTGGTTTTTGTGCTGATGGATTTCACCGTGCTCTTGTCTATGATTTCTTTCCAAATGGTTCATTGCAAAATGAGATTGACTCCTTAGAATCACCTACAGATGGATCAGAGGATGACCATGTTGAACTTGTACGATCTCTAATATCCAATGCAGGTGAATCTTGTGCATATAGGTAA 531 0.4143 MCYPESCWLLLMITWSKPDCSECEAKRKLCQLDNNGAEDAIQCYDHPPKPISEIGYAAMDHFKDKLGEGAHGAVFKGKLSNEILVAVKMLNNADGDMTEFINEVRTMAKIHHVNVARMLGFCADGFHRALVYDFFPNGSLQNEIDSLESPTDGSEDDHVELVRSLISNAGESCAYR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1196 176 SUPERFAMILY Protein kinase-like (PK-like) 48 148 IPR011009 -
Dere04g1196 176 Gene3D Phosphorylase Kinase; domain 1 61 142 - -
Dere04g1196 176 ProSiteProfiles Protein kinase domain profile. 60 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1196 176 ProSitePatterns Protein kinases ATP-binding region signature. 66 88 IPR017441 GO:0005524
Dere04g1196 176 Pfam Protein tyrosine and serine/threonine kinase 62 147 IPR001245 GO:0004672|GO:0006468
Dere04g1196 176 PANTHER RUST RESISTANCE KINASE LR10-RELATED 57 145 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1196 Dere-ChrDere04 13376058 13381139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1196 9 151 Receptor kinase-like Gene Family AT1G66910 33.333 6.51e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere04g1196 PK_Tyr_Ser-Thr 7.1e-16 CL0016