Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1195 ATGGTTTCAACCACCATGTGTGAAGCCAAAGCTTTGTATTTCTTCTTCATCCCTTTTGCCTTGCAAACATGTACTGCAAAGCAACACCGATACTGTGCTCCTTCTTCCTGCGGCAAACTCCCCAACATAAGCTATCCATTTCGATTAAAACAAGACCCGGACAAGTGTGGCGAGCGCAGATATGAGTTAGATTGTGTCAACAACGTTGCTGTCTTACATTTGAACCATGCGGAATACCATGTCGATTTCTCCCCCGCCTCTGACTTGGATTTTTACTTCAACGATCAACAGGTGGATTCATATCAACCCACTCAAGCCACAGATTACAACGGCTGGGGGCATTCGTGGTTCCTCTTATTCGACCCAATAATTTACTTGAAGTGTGCATATACTGTGAGGGATGGTTCTCATGCGGATACCACATCGTGCCTTGATTATTCGAACACGTACGCTATTGTTGGGGACATAGATCTAGCGAGTTGGAGGCCTAGTTGTCATGCGAAGGCAGTGTCTCCTACTTCCTGGACAAGGCCTGCAGTAACTGACCTTGCTAATGTTGATGCCAATCCTATTGCAAATGTTTCATACATTGATATTCATAGGCAACTAGTCTATGGATTTGAGCTTTCCTGGATGCAGTTTGTTTGCCATTCTGATTGCGGGTCCATGTCTTGCTACTTCAACTATACTGTTGAAGCCATTCAGTGTTACAATGACACTCACTGTTACTATATCAATGGAGGGGCCCACTCCTGCTATGCTGTAGGAATTTTGGTAAGGATCGGCATTTATACCAAAGCTTCTTTTTCCGGCATTTTAACTGGACTATACTGGTTAATTACATTTCGTGGCATGCATAATGACAACGCAAATGCAATTAACAGAGCAGTAGTGGTCGGATATTATGGCCTACCATCATTTGTGGCAGCAAGGTTTCTGTTTGTTCTGATTGTCATATTGATTCATAAATGGCGGAGAAGACATTTATCAGTTTATGATAATATTGAAAACTTGCATGATTACGAACTTATGCCCATAAGGTACTCTTACAAAGAAATCAAGAAGATGACCTGCAATTTCAAGACCAAATTGGGTCAAGGTGGTTTCGGCTCTGTGTACAAGGGGAAGTTGCGTAGTGGGCCTTATGAAGCCATAAAGATGTTGGGTAAAGCTGAAACTAATGGGCAAGAGTTTATCAGTGAAGTGGCAACCATTGGAAGGATTCACCATGTGAATGTGGTTCGGCTTATTGGATATTGTGTTGAAGGGTCCAAACGTGCTCTTGTTTATGAGTATATGTCTAATTGCTCTCTTGATAAATATATTTTCTTGAAAGAAGGAGACATCTCTTTAAGTTGTGAGAAAACATATGAAATATCTCTTGCAGTGGCCCGTGGAATAGCTTATCTTCATGAGGGTTGTCATATCCAAATTTTGCATTTTGATATTAAGCCTCACAACATTCTTCTTGATGAAAATTTCATTCCTAAAATTTCAGATTTTGAACTTGCAATGCTTTATCCAACGAATGATGGTATTGTCACTTTGACTGCTGCAAGAGGAACACTTGGTTATATGGCTCCAGAATTGTTTTACAAGAATATTGGAGGAATCTCTTATAAAGCTGATGTTTACAGCTTTGGGATGCTTTTGATGGAAATGGCAGGTAGGAGGAGAAATTCAAAGCCAAATGCAGAGCATTCAAGCCAAGCTTACTTTCCCTTTTGGATTTATGATCAATTTAGTGAAGAGAAAGATATGGAATATGAAGGTGTTACAGAGGATGAAAAAGACTTGGCAAAGAAGATGTTCATAACTGCACTGTGCTGTATACAATTAAAGCCTCATGATCATCCATCAATGAACAAAGTGGTAAAGATGCTTGAAGGAAAAACGGAAAGCTTGGAGATGCCTGCAAGGCCATCATTTTATCCGGATGAAACTGTAGCAGAGGATGTCACAATCAACTTTAGTGGAACAATTACAAGCGACGTGACTGCAACTTCAACTAGCTATAGCTGGCAAAGCAGTGATCCTAACCAAACAATAGTCCTTGAGAGAAGAAAGTAA 2070 0.4058 MVSTTMCEAKALYFFFIPFALQTCTAKQHRYCAPSSCGKLPNISYPFRLKQDPDKCGERRYELDCVNNVAVLHLNHAEYHVDFSPASDLDFYFNDQQVDSYQPTQATDYNGWGHSWFLLFDPIIYLKCAYTVRDGSHADTTSCLDYSNTYAIVGDIDLASWRPSCHAKAVSPTSWTRPAVTDLANVDANPIANVSYIDIHRQLVYGFELSWMQFVCHSDCGSMSCYFNYTVEAIQCYNDTHCYYINGGAHSCYAVGILVRIGIYTKASFSGILTGLYWLITFRGMHNDNANAINRAVVVGYYGLPSFVAARFLFVLIVILIHKWRRRHLSVYDNIENLHDYELMPIRYSYKEIKKMTCNFKTKLGQGGFGSVYKGKLRSGPYEAIKMLGKAETNGQEFISEVATIGRIHHVNVVRLIGYCVEGSKRALVYEYMSNCSLDKYIFLKEGDISLSCEKTYEISLAVARGIAYLHEGCHIQILHFDIKPHNILLDENFIPKISDFELAMLYPTNDGIVTLTAARGTLGYMAPELFYKNIGGISYKADVYSFGMLLMEMAGRRRNSKPNAEHSSQAYFPFWIYDQFSEEKDMEYEGVTEDEKDLAKKMFITALCCIQLKPHDHPSMNKVVKMLEGKTESLEMPARPSFYPDETVAEDVTINFSGTITSDVTATSTSYSWQSSDPNQTIVLERRK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1195 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Dere04g1195 689 Gene3D Transferase(Phosphotransferase) domain 1 433 640 - -
Dere04g1195 689 Pfam Protein kinase domain 360 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1195 689 Gene3D Phosphorylase Kinase; domain 1 334 432 - -
Dere04g1195 689 FunFam serine/threonine-protein kinase PBS1-like 327 432 - -
Dere04g1195 689 SMART serkin_6 358 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1195 689 SUPERFAMILY Protein kinase-like (PK-like) 340 629 IPR011009 -
Dere04g1195 689 PANTHER RUST RESISTANCE KINASE LR10-RELATED 333 647 IPR045874 GO:0004672
Dere04g1195 689 FunFam PR5-like receptor kinase 433 640 - -
Dere04g1195 689 ProSiteProfiles Protein kinase domain profile. 358 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1195 689 Pfam Wall-associated receptor kinase galacturonan-binding 32 81 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1195 Dere-ChrDere04 13366537 13369776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1195 14 671 Receptor kinase-like Gene Family AT5G38260 32.621 2.15e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere04g1195 Pkinase 8.5e-41 CL0016