Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1189 ATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAACTAGCAGAGAGGAAATTCTCAGAAAGGGAATATGCTGGTGCAAAGAAGTTTGCTCTCAAGGCTCTAAATCTGTATCCTGCTCTGGAGGGTATTTCTCAGTTTTTGACTAATCTTGATGTTTATATCTCTGCCGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAAGCCCTGCGCTGATGATGAGACAGTTAGAAAACAGTACAGAAAGCTGGCTCTTACTCTTCACCCTGACAAAAACAAGTCTTTAGGTGCCGAAGGTGCATTTAAGCTGGTTTCAGAGGCCTGGAGTTTATTGTCAGATAAGGCCAAGAGACTAGCATATAACCAGAATAGGAGTTTGAAAGGAAATCAACATAATACTCCCAACCATGTTAGATCTCAGTCACAAGCACCCAGTACTAATGGTTTTCATAATTTCAACAAGAATGCAACTGCAAATGTGAGGAATGGAAATAATAAGGCTCGCACACAACCCAACTCAGCTCCCCCTCCACAAAAAATGGCAGGTACTTTTTGGACTATCTGTAAGCGGTGCAAGACACATTATGAGTACCTCAGGATCTATTTGAATCATACCCTTATTTGTCCCACCTGTAATGAGCATTTCTTGGCCATCGAGAAGCCTCCACCTCCCAATATTTTAAAGTCAGCAAATTGGTCTTCTAGCCAACAGCATCAGAATTCTCAACAACATGCTGCAAGTAATAATCCAGGAACAAATTGTGCAGTTTCTCAAAATCCCGAAGTTGGTGATTCTTCTGGCATATTTTCTTTTAACAACACAAGCTTTCAGTGGGGTCATCACTCCAAAATGGCTGGTTTTGGTAGCACAGATGGTTCATCATCTGTTGCTGCTCAAGCAGCAAATGTTGTACAGAAGGCAAGTGAGAAGATGAGAAAAGATCGAGACAGAGCACCATCAATTGCTGAATGGGAGAGGAGTCAAATGCTGAAGAGGACTGAAGGTTCTTTTATCAAGGGAGAAAAACCTTTCAAGAAGAGGAGGACAGATGAGATTCGTATTAATGGTAATCAATGCATGACTAATCATATGGCCATGGGTCATGGAGCAGCAGGTTTAGGGTGTGTTTCTGAATCTGGAAAGTCTAACTGGGAAACAGAAAGGACATCTGGGTATTTTGGCATTACCAGCAAGCCTCACAGCACAAGAGATTTATCAATGTTTGAAATACGGAACATATTGACGGATAAGGCTCGGACTGAAATTCGCAAGAAAGTTAAAGAAATGAGATCAACAGTTGAAGCTAAGAATAGCGACAAGCAAAAACAAAATAAGAGAAGAAAAAGCACATTGAATGATAAAACTGACGCAGAGAAGCATGGTGAGTCCACTCTTAATGGAAACAAGCATCTGGACAGTGATTCTTTCCCAGTTGCATCACATGATACAGTCAAGGCAGACCAAGTCTATATCACAATCAATGTTCCAGACTCAGATTTTCACAATTTTGACTTGGATAGAACTGAAAATTCTTTTGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGGATGCCTCGGTATTATGCTAGAATTTACAAGGTGATCTCCTTGAAGCCATTTAGAATGCGGATCAGCTGGCTTAACTCTCGAAGCAATAGTGAACTTGGTCCAATAGATTGGATAGGCTCTGGTTTCTATAAAACTTGTGGGGATTTCAGGACTGGCAGGCATGAAATAACTGAATCATTAAATTCATTTTCACACAAGGTTAGGTGGACAAAAGGTTCTAGAGGAGTAGTTCACATCTTTCCTGGAAAGGGGGAAGTCTGGGCTCTTTACAGAAACTGGTCTCCAGATTGGAGCCAACATACTCCAGATGAAGTGATACACAAGTATGACATGGTAGAGGTGATCGAAGATTTTGACAAGGAGCAAGGTGTTTTAGTTACCCTGCTTGTTAAGGTTGCTGGTTTTAGGACCGTGTTTACTAGGCATGGAGAACCTGATCGGTTGAGGAGGATTCCTAAAGAGGAGTTGTTTCGCTTTTCTCATCAGGTTCCATATTACTTGCTCACGGGCCAAGAAGCTCATAATGCCCCAAAAGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAAACCTCCTGCAGTGTATGACAGAAGCTAATGAGGCATCGGATGATGTTGAAAAACCTGGGGATGACACATTGCCCAGTTCAACTGAAAAGCATGCGTTTGGGACGGAGGAGAATGCTCCAAAAACTAGTACAGGAGAAATGATAGACGAAGGTGGTGAAGCAGAGAAACGTTGTTAG 2343 0.4213 MECNKDEAVRAKELAERKFSEREYAGAKKFALKALNLYPALEGISQFLTNLDVYISAENKVSGEMDWYGILGVKPCADDETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKAKRLAYNQNRSLKGNQHNTPNHVRSQSQAPSTNGFHNFNKNATANVRNGNNKARTQPNSAPPPQKMAGTFWTICKRCKTHYEYLRIYLNHTLICPTCNEHFLAIEKPPPPNILKSANWSSSQQHQNSQQHAASNNPGTNCAVSQNPEVGDSSGIFSFNNTSFQWGHHSKMAGFGSTDGSSSVAAQAANVVQKASEKMRKDRDRAPSIAEWERSQMLKRTEGSFIKGEKPFKKRRTDEIRINGNQCMTNHMAMGHGAAGLGCVSESGKSNWETERTSGYFGITSKPHSTRDLSMFEIRNILTDKARTEIRKKVKEMRSTVEAKNSDKQKQNKRRKSTLNDKTDAEKHGESTLNGNKHLDSDSFPVASHDTVKADQVYITINVPDSDFHNFDLDRTENSFEEDQVWAAYDDDDGMPRYYARIYKVISLKPFRMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRTGRHEITESLNSFSHKVRWTKGSRGVVHIFPGKGEVWALYRNWSPDWSQHTPDEVIHKYDMVEVIEDFDKEQGVLVTLLVKVAGFRTVFTRHGEPDRLRRIPKEELFRFSHQVPYYLLTGQEAHNAPKGCRELDPAATPLNLLQCMTEANEASDDVEKPGDDTLPSSTEKHAFGTEENAPKTSTGEMIDEGGEAEKRC 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1189 780 MobiDBLite consensus disorder prediction 131 185 - -
Dere04g1189 780 MobiDBLite consensus disorder prediction 733 747 - -
Dere04g1189 780 SMART dnaj_3 65 122 IPR001623 -
Dere04g1189 780 PANTHER BNAC03G44070D PROTEIN 1 721 - -
Dere04g1189 780 Pfam DnaJ domain 66 127 IPR001623 -
Dere04g1189 780 MobiDBLite consensus disorder prediction 750 764 - -
Dere04g1189 780 Pfam Domain of unknown function (DUF3444) 498 704 IPR024593 -
Dere04g1189 780 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Dere04g1189 780 MobiDBLite consensus disorder prediction 232 265 - -
Dere04g1189 780 MobiDBLite consensus disorder prediction 433 482 - -
Dere04g1189 780 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Dere04g1189 780 Gene3D DnaJ domain 63 176 IPR036869 -
Dere04g1189 780 MobiDBLite consensus disorder prediction 733 780 - -
Dere04g1189 780 MobiDBLite consensus disorder prediction 233 265 - -
Dere04g1189 780 MobiDBLite consensus disorder prediction 433 473 - -
Dere04g1189 780 CDD DnaJ 66 119 IPR001623 -
Dere04g1189 780 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Dere04g1189 780 PRINTS DnaJ domain signature 86 101 IPR001623 -
Dere04g1189 780 PRINTS DnaJ domain signature 68 86 IPR001623 -
Dere04g1189 780 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1189 Dere-ChrDere04 13268415 13270757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1189 4 233 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.085 1.90e-27 112