Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere04g1180 | ATGGCAGAGGCTGTTCGTATGGCCATTGCAGTTATTGGGAATGCTGCCTCAGTTGCCCTTTACGCTGCTCCAACGGTTACCTTTAAAAGAGTCATAAAAAAGAAAAGCACAGAGGAGTTTTCATGCATTCCCTACATCATCGCATTGTTGAACTGCCTCCTCTTTACTTGGTATGGATTGCCTATCGTAAGCAACAAATGGGAAAATTTGCCTCTGGTCACAGTTAATGGCGTTGGGATTGTTCTCGAGCTATCCTATGTTCTCATTTACTTCTGGTATGCTTCAGCCAAAGGAAAGGTGCAGGTAGCCATGACAGCAGTGCCAGTTTTGATAGTGTTCTGCATCGCTGCTCTTGTCTCCACTTTTGCCTTACATGACCATCGTCATCGAAAGCTACTCGTGGGTAGCATAGGCTTAGTGGTTTCAGTTACAATGTACGGCTCTCCTTTGGTTGTAATGAAGAAAGTGATAAAGACCAAGAGTGTGGAATTCATGCCACTACCCCTGTCTTTGTGCTCATTCCTAGCTAGTGCACTCTGGATGACTTATGGACTCCTCATCCGTGACATTTTTGTTGCCGGTCCAAGTGTGGTTGGAGTTCCATTAGGCATCCTCCAGCTGGTGCTCCACTGCAAATACTGGAAAGGAAGAGTTATGGAAGAACCAAACAAGGAGGATCGAGAAAAGGGGGGACTGGAATTGGGGGACACAGAAAAGACGAACTTAGAAAAGAATATGACAAAATCATAG | 750 | 0.452 | MAEAVRMAIAVIGNAASVALYAAPTVTFKRVIKKKSTEEFSCIPYIIALLNCLLFTWYGLPIVSNKWENLPLVTVNGVGIVLELSYVLIYFWYASAKGKVQVAMTAVPVLIVFCIAALVSTFALHDHRHRKLLVGSIGLVVSVTMYGSPLVVMKKVIKTKSVEFMPLPLSLCSFLASALWMTYGLLIRDIFVAGPSVVGVPLGILQLVLHCKYWKGRVMEEPNKEDREKGGLELGDTEKTNLEKNMTKS | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere04g1180 | 249 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 16 | 224 | IPR047664 | - | |
| Dere04g1180 | 249 | Gene3D | - | 132 | 225 | - | - | |
| Dere04g1180 | 249 | FunFam | Bidirectional sugar transporter SWEET | 7 | 99 | - | - | |
| Dere04g1180 | 249 | MobiDBLite | consensus disorder prediction | 223 | 249 | - | - | |
| Dere04g1180 | 249 | Pfam | Sugar efflux transporter for intercellular exchange | 9 | 97 | IPR004316 | GO:0016020 | |
| Dere04g1180 | 249 | Pfam | Sugar efflux transporter for intercellular exchange | 133 | 214 | IPR004316 | GO:0016020 | |
| Dere04g1180 | 249 | FunFam | Bidirectional sugar transporter SWEET | 130 | 223 | - | - | |
| Dere04g1180 | 249 | Gene3D | - | 10 | 106 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere04g1180 | Dere-ChrDere04 | 13190788 | 13192711 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere04g1180 | 1 | 249 | Miscellaneous Gene Families | AT5G53190 | 53.696 | 1.14e-101 | 295 |