Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1175 ATGTCGATAGAAGAGAATAATGGCACGACAGTGTACAAAAGAACTTGCATGATTCTACCGCCTCAGGTGAGTTCCAGGAGCATATGGGTAGGCCACTTCGGGGATTTCGTCAAAAGTTCTTTGCCAACTTTGCAGATGCAAATGTGTCTCATTTATTTTGGGACTCTCTTCTTCCACACCTTTCTGGGCCATTTAAGAATCCCCAGATTCACTTCCATGATCATTATGGGCCTAATCTTGGGTAGTACTTTCGGCAAAACCGGGGCTGAGAAGATTGTATTCCCCTTTGATTCACAAGAAACCCTGGGATTGATCTCGGTGTTTGGTTACATTCTGTTCCTCTTCTACATTGGAGTCAAAACGGATTTAAGTATGGTTCATCGAACGGGAAGGAAGGCCATGAACCTCGGAGCTGTAGCCATTTTGGCTCCATTCCTGTGTGGTATGCTTGTTCAGCATTACGTCTCATCAAAATACTTGAACCCAAGACAGCGTGCAAAACTTCCTTTCATCATTGGGATATTTTCTATATCCCCTTTTCCAGTCATTTCCTCTGTGTTGAGCGATCTAAAGATCTTGAATTCGGAATTGGGACGGTTGGGGCTGTCCTCAGCAATAGTGAGCGAGACGTTGAGTATATTCTTGGCATCCATGGTAGCCTTCTGTAACAACATGATATATATTGGTAAATTGAGAGCATTGACGGATATGGCAGTGGTAGTGGTGTTCGTTCTCTTCCTTGTCTTCGTCTTTCGCCCTGCCATGCTTTGGATTATAAAACAGACACCGGAGGGTTGTCCTGTTAATGATCACTATGTTTATTGCATATTTATAGTAGCTCTCTTGTCTTCCTATGCCTCCCATCACTTTAATTTCCTTGCTCTCTTTGGGCCTTATCTCATGGGTTTGGCTATCCCAGAAGGACCTCCTCTAGGGACTGCCATTATCAAGAAGATTGACACCTTCGTCAATGGCGTTTTGATGCCAATCTTCGTGACTACATGTGCAATGAGGGTGGATCTCAAAGAATTCCTGTATTGCAGGAGCAAAATAGATGGAAAAGTTGATCCTTTCATGCTACAAGTCTCCCTCCTCGTTGTTGTAACCTTTGTTACCAAAATTGTTTTCTGCTTGCTGCCTCCGTTGTACAACAAGATGCCCTTGAAAGATGCTATAACTCTCTCATTGATTATGAACTGCAAAGGCATAGTCGAAATGGCTACAAGTTCCTTCATGAGAGATATCACGGGCTTACCTGATAACGTCTTCTCTTTCTTGATGATATGCATGGTGGTAAACGCTACAATCATGCCGATCCTCTTGAGTGTTCTGTACGACCCTTCGAAGAAATACGCAGGTTACACAAAGAGGAACATAATGGATCTAAGAAGCAACTCGGAACTTCGAGTTCTGACATGCATTCACAGACCCGACAATATTCCCCCTGCAATCAACCTTCTGGAAGCAGCATACCCAACAAAAGAAGAGCCACTCGGCGTCTTCGTCCTTCACCTTATAGAACTAATAGGCAGTGCAACCCCTGTTTTCATATGCCACCAGTTGCAAAAGAAGACCAAAACAAGAAGCACCTTCGCGGAGAACCTTATTGATGCATTCAACAGCTTTCAACAGGAGTTCAACGGGGCATTAACAGTTAACACCTTCACCGCCGTCTCGCCGGCGGAGATGATGAACGACGACATTTGCACGCTGGCACTCGACAAGCTCACATCCCTTATAGTCCTCCCATTTCATCAGAAATGGTCTTCAGAAGGGAATAGCATTGAGCTAGATGACAAATCCCTAAGAGATTTAAACTACAGTGTGCTCCAAAGAGCACCTTGTTCCGTCGGAATCTTAATAGAGAGGGAACAAATGACACACACATTCTCCCCGGAGACACCCTACTGCGTTTGCTTGATTTACATAGGAGGAAAAGATGACATGGAGGCGTTTTTATTTGCCAAGAGAATGACAAAAAACCCGCACGTGAGGCTGTCCGTGATTCGGTTCAAAGCTTCAGGAGACAGCCAGGAAATCAAAGACTGGGAGACAGTGCTTGAAAGTGAGATGCTTGAGGACGTTAAGGTGAGGCAAAAGATTGGAGATGTGCATGTGGTGTACAGAGAAGAAACTGTGAAAGATGGACCAGAGACGGCTCTGATATTGCGTTCGTTGGTGAATGAATACGATCTGATAATTGTGGGGAGAAGAGATGGATTTGAGAGTCCTCAAACTTCTGGGCTATCTCAATGGAGTGAGTACCCTGAACTTGGGGTGTTGGGGGACCTGCTTGCCTATGTACCTGGCAGAGCTTCTATTTTTGTTATGCAACAACAAAGAATGGCCTCCAAGTTGTAA 2361 0.446 MSIEENNGTTVYKRTCMILPPQVSSRSIWVGHFGDFVKSSLPTLQMQMCLIYFGTLFFHTFLGHLRIPRFTSMIIMGLILGSTFGKTGAEKIVFPFDSQETLGLISVFGYILFLFYIGVKTDLSMVHRTGRKAMNLGAVAILAPFLCGMLVQHYVSSKYLNPRQRAKLPFIIGIFSISPFPVISSVLSDLKILNSELGRLGLSSAIVSETLSIFLASMVAFCNNMIYIGKLRALTDMAVVVVFVLFLVFVFRPAMLWIIKQTPEGCPVNDHYVYCIFIVALLSSYASHHFNFLALFGPYLMGLAIPEGPPLGTAIIKKIDTFVNGVLMPIFVTTCAMRVDLKEFLYCRSKIDGKVDPFMLQVSLLVVVTFVTKIVFCLLPPLYNKMPLKDAITLSLIMNCKGIVEMATSSFMRDITGLPDNVFSFLMICMVVNATIMPILLSVLYDPSKKYAGYTKRNIMDLRSNSELRVLTCIHRPDNIPPAINLLEAAYPTKEEPLGVFVLHLIELIGSATPVFICHQLQKKTKTRSTFAENLIDAFNSFQQEFNGALTVNTFTAVSPAEMMNDDICTLALDKLTSLIVLPFHQKWSSEGNSIELDDKSLRDLNYSVLQRAPCSVGILIEREQMTHTFSPETPYCVCLIYIGGKDDMEAFLFAKRMTKNPHVRLSVIRFKASGDSQEIKDWETVLESEMLEDVKVRQKIGDVHVVYREETVKDGPETALILRSLVNEYDLIIVGRRDGFESPQTSGLSQWSEYPELGVLGDLLAYVPGRASIFVMQQQRMASKL 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1175 786 PANTHER CATION/H + ANTIPORTER 25 781 - -
Dere04g1175 786 Pfam Sodium/hydrogen exchanger family 50 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere04g1175 786 CDD USP_Like 644 738 - -
Dere04g1175 786 Gene3D - 43 452 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1175 Dere-ChrDere04 13126451 13129140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1175 16 765 Antiporter Super Family AT3G44900 38.854 0.0 537