Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1157 ATGTCTAGCACAGCTGGTCGGGTTATCAAGTGCAGAGCTGCGGTGGCTTGGGAAGCAGGGAAGCCACTGGTGATTGAAGAGGTAGAGGTAGCGCCTCCGCAGGCTGGAGAAGTGCGTTTGAAGATCCTCTTCACCTCCCTTTGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGCCAAACTCCACTGTTCCCTCGAATATTTGGTCACGAAGCTGGAGGAATTGTGGAGAGCGTAGGGGAGGGAGTGACTCATCTGAAACCAGGAGATCATGCGCTCCCTGTCTTCACAGGGGAGTGTGGGGAATGCCCACACTGTTTGTCTGAAGAAAGCAACATGTGCGACCTTCTGAGGATCAACACGGACAGGGGTGTTATGATCAATGACGGTAAGACGAGGTTTTCTAAGAATGGACAGCCCATTTACCACTTTGTGGCAACCTCCACATTCAGCGAGTACACTGTTGTTCATGCTGGATGTGTTGCTAAGATCAACCCTGCTGCCCCTCTTGACAAAGTTTGTGTTCTCAGTTGCGGAATCTGCACAGGTCTTGGTGCTACTGTAAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCCATCTTTGGACTGGGAGCCGTTGGCCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCCAGAATCATTGGAGTTGATTTAGTATCCAGCCGTTTTGAGGGAGCCAAGAAGTTTGGGGTTAATGAGTTTGTGAACCCAAAAGATCATGATAAGCCTGTACAGCAGGTAATAGCTGAAATGACCAATGGAGGTGTGGATCGTGCTGTTGAATGTACTGGGAGCATCCAAGCCATGATCTCAGCATTCGAATGTGTCCACGATGGTTGGGGTGTTGCTGTACTGGTTGGAGTGCCCAACAAGGATGATGCATTCAAAACTCATCCTATGAATTTCTTGAACGAGAAGACTTTGAAGGGTACCTTCTACGGCAACTACAAGCCCCGCTCAGATCTCCCTTCTGTTGTGGAGAAGTACATGAAAGGGGAGCTGGAACTGGAGAAGTTCATCACTCACTCTCTACCTTTCTCGGAGATTAACAAAGCCTTTGATTACATGCTGAAAGGGGAGTCCATCAGGTGCATCATTCGCATGGAAGACTGA 1143 0.4899 MSSTAGRVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCLSEESNMCDLLRINTDRGVMINDGKTRFSKNGQPIYHFVATSTFSEYTVVHAGCVAKINPAAPLDKVCVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFEGAKKFGVNEFVNPKDHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNFLNEKTLKGTFYGNYKPRSDLPSVVEKYMKGELELEKFITHSLPFSEINKAFDYMLKGESIRCIIRMED 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1157 380 CDD alcohol_DH_plants 9 377 - -
Dere04g1157 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Dere04g1157 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Dere04g1157 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
Dere04g1157 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Dere04g1157 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Dere04g1157 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Dere04g1157 380 Gene3D - 19 370 - -
Dere04g1157 380 Gene3D - 183 321 - -
Dere04g1157 380 SUPERFAMILY GroES-like 4 187 IPR011032 -
Dere04g1157 380 PANTHER ALCOHOL DEHYDROGENASE 7 376 - -
Dere04g1157 380 Pfam Zinc-binding dehydrogenase 206 333 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1157 Dere-ChrDere04 12918582 12920971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1157 37 346 Monolignol Biosynthesis Gene Families AT4G37990 24.920 4.99e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1157 04 12918582 12920971 Dere04g1157 04 12918582 12920971 ECH