Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1148 ATGGTACCTCCGGGACCACCCACTCCAATTGGTGGTGCCCAGTCTGTCTCGCCCTCTCTTTTGAGATCGAATTCCGGAATTTTGGGAGCTCAAGGGGGTCCTATGCCTTCACAGACTTCTTTTCCCTCGCTTGTGTCACCACGCTCTCAGTTTAACAACATGAACATGCTAGGAAATATGTCCAATGTATCTTCCATACTGAATCAGTCTTTCCCAAATGGGGTTCCGAATTCTGCACTCTCTGGTCCTGGAAGTAACCAGCGTGGAGGTGTTGATGCTGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAATGGAATGAACTTCAATAATACTTCATCCTCATTTGTACAAACAAATATGGTGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTGGTAACCAGCTGTTGCCAGATCAACCGCATTCCCAACTTGAAACCCAAAATTTCCAACATGGTCAGCAGTCAATGCAACAGTTCTCATCTCCTCTGAACACTCAGCAACAACAGCAGCAGCAGCATTTTCAATCAATTCGAGGAGGAATAGGTGGCATAGGACCTGTCAAATTGGAGCCCCAGGTAAGCAATGATCAACTTGGACAGCAACAGCAGCAGCAGATGCAATCATTGAGGAATCTTGCTCCAGTGAAATTGGAACCTCAACCAATGCAAACAATGAGAACTATGGCACCAGTAAAAATGGAGCCCCAGCATTCAGATCAGTCATTATTTTTGCATCAACAGCAACAGCAGCAACAACAGCAGCATCAGCAGCAGCAGCAACAATATCTCCACATGTCAAGGCAACCCCCTCAGGCTACTGCTGCTCAGCTTAATCTATTGCACCACCAGAGACTGTTGCAATTACAACAACAGCATCAACAGCAACAACTCTTAAAAACAATGCCTCAGCAACGGCCTCAACTACCACAGCAATTTCAACAGCAGAATATGCCTATAAGGTCACCTGTGAAATCAGTATATGAACCTGGAATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTTCCACAGGATGTATGGCACTGTGAAATATGTAATCGGAAACCTGGCCGTGGTTTTGAAGCAACTGTTGAGGTTCTACCCAGGCTCTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTACTTTATGTTGACATGCCTCGCGAATATCATAATCCCTCTGGTCAGATTGTTCTGGATTATGCGAAAGCAATTCAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGATCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAGGAGCTTATCCCAAGAAGACTATTAATTCCTCAGGTTAGTCAGCTTGGAGCTGCTGCTCAAAAATACCAGGCTTTTACTCAGAATGCAACACCTAATTTATCTGTTCCCGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCTCGTCAGTTGGCAAAAGCCCTAGAAGTGCCATTAGTTAATGACTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCTGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGATAAAGGGATTGGACCTATGGAGAGCTTGGCCAAATATCCTCGGAGAACTAGTAGTTCATCTGGACTTAATAGTCAAGCTCAACTGCCTGAAGATCAATTACAGCAGCAGCAGCAGCAGCAACAACAACTACAAATGGCTGCCCAAATCTCAAATGGTGATCAAAACTCGGTACAAGCGGCTGCCATGCAAATAGCTTCTAGCAATGGTGTGGCCAGTGTAAATAACTCTATCAATCCAGTATCTGCATCAACTACCCCAAGCACCATTGTTGGACTTCTCCACCAAAACTCTATGAATTCTAGGCAACAGAATTCCATGAACAATGCCAACAGTCCATATGGAGGTAGCTCTGTTCAGATACCATCGCCAGGTTCTTCCAGTACAGTGCAACCAGCACAACCAAACCCATCACCTTTCCAAGCACCAACACCATCCTCATCTAATAACCCGCCACAAACTTCTCACTCTGCTCTAACAGCTGCCAATCACATGAATTCATCTAACTCACCAGCTAATGTTTCCTTGCAACAACAGCAGCCAACCCTTTCTGGTGATGCCGACCCCAGTGATGCTCAGAGTTCAGTCCAAAAAATCTTATCAGGGATATACACCCAAAATAATGGCACTGGTGGGATGGTAGGAGTTGGCTCTTTTGGAAATGATGTCAAGAATGTGAATGGGATGCTGCCAGTGAGTACCAATACAGGTCTCAACAGTGGCAACTGTCTGTCTGGCAATGGGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGATATGGTACAATGGGCGGTGGACTTGGTCAATCTGTTATGGTCAATGGAATCAGAGCTGCAATGGGAAATAACTCAATCATGAATGGGAGGGGAGGAATGGCTACTATTGCACGAGACCAAGCTATGAATCATCAACAGGATTTGTCAAATCAACTGCTTAATGGCCTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTGGAAAGCTTCCCCATGA 2763 0.4408 MVPPGPPTPIGGAQSVSPSLLRSNSGILGAQGGPMPSQTSFPSLVSPRSQFNNMNMLGNMSNVSSILNQSFPNGVPNSALSGPGSNQRGGVDAGAKTDPLSSVGNGMNFNNTSSSFVQTNMVNPGSSGQGQGQQFSNPSGNQLLPDQPHSQLETQNFQHGQQSMQQFSSPLNTQQQQQQQHFQSIRGGIGGIGPVKLEPQVSNDQLGQQQQQQMQSLRNLAPVKLEPQPMQTMRTMAPVKMEPQHSDQSLFLHQQQQQQQQQHQQQQQQYLHMSRQPPQATAAQLNLLHHQRLLQLQQQHQQQQLLKTMPQQRPQLPQQFQQQNMPIRSPVKSVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNPSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRDKGIGPMESLAKYPRRTSSSSGLNSQAQLPEDQLQQQQQQQQQLQMAAQISNGDQNSVQAAAMQIASSNGVASVNNSINPVSASTTPSTIVGLLHQNSMNSRQQNSMNNANSPYGGSSVQIPSPGSSSTVQPAQPNPSPFQAPTPSSSNNPPQTSHSALTAANHMNSSNSPANVSLQQQQPTLSGDADPSDAQSSVQKILSGIYTQNNGTGGMVGVGSFGNDVKNVNGMLPVSTNTGLNSGNCLSGNGAVNSNSGVGVGGYGTMGGGLGQSVMVNGIRAAMGNNSIMNGRGGMATIARDQAMNHQQDLSNQLLNGLGAVNGFNNLQFDWKASP 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1148 920 MobiDBLite consensus disorder prediction 74 199 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 599 627 - -
Dere04g1148 920 Pfam LIM-domain binding protein 343 597 IPR029005 -
Dere04g1148 920 PANTHER LIM DOMAIN-BINDING PROTEIN 234 909 IPR029005 -
Dere04g1148 920 MobiDBLite consensus disorder prediction 1 44 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 689 722 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 12 44 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 734 782 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 600 627 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 241 280 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 101 185 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 247 280 - -
Dere04g1148 920 MobiDBLite consensus disorder prediction 689 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1148 Dere-ChrDere04 12809542 12816177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1148 1 918 C2H2 Transcription Factor Family AT1G43850 61.595 0.0 778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1148 04 12809542 12816177 Dere04g1148 04 12809542 12816177 ECH