Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1147 ATGAAAGTACCTTCCCTTCTAGAGAGGCTTTCAGCATGGGATGCAAGCATTATTTCCCAAGAAGGATCTGCCGGCCAGCTATCTGTCGATGTTAGATCCTCCACTGTACAACTGGTTTTTCTTACTTTTGGAAATGTGTTTGCTTTTTCTTGGTTCCAGATTTTTGAATTGGAACCTGGTCTATATAAAAGTATTCATGACTTTGTCATGAGAAACATGCATGGAAGATTTGAAGTTCTTGGCCACTCTCTATATGTTGATGGGGATACCCAGTATAGAGAACACCATAAGAGCGAGTGGCACAAGCACAATATGAAGCGCAAAACCAGGCAACTGCCTCCCCTTACTGAGGAAGAGTGCGTGGCAGACCTGGAATTGGGTGACTCAAAATCTGATTTGAAGGATTATTTTATATTCTTGTGTCTCTGGTTCGGGAGAGTTTTGGAAGATAATGAGAGTTGGATAAAACATGATATTCTGAGCAAGAGGAAGAAAGCCTGCGTTACCTTTTCAATAAAGAATTACTGCCTCAACAGAGAACACAGAATTAGCATGGCTCTGGAGAACTGTTTAAGACTGACCACAGTGGGCATGGCCAGACCTCAATGCATTCATCCGTTTTCTTCAAGGGGAAAGCTTGTTGTCGCCAATTTCAAAGGATTCAAATCAACAGTATCAAACCCAGCTCTCAAATCAACCACTGGTAACTACAGAAGATCCCGTTTTATCTGCAATGCTCGTGAAGCAGTTGATGAAGTTCGAGTAGTGACAGATTCAACCTGGAAAAACCTTGTAATAGCGAGTGAAACCCCAGTGCTAGTGGAGTTTTGGGCACCATGGTGTGGTCCGTGCAGGATGATAGCCCCCGTAATTGATGAATTAGCAAAAGAGTATGCTGGTAAAATTGCATGCTACAAGCTCAACACCGATGACTCTCCAAACATACCCACACAATATGGAATCAGGAGTATACCAACGGTTCTCTTCTTCAAAAATGGTGAGAAGAAAGAAAGCGTAATTGGTGCAGTTCCCAAGTCCACCTTGTCTGCGACACTGGAGAAATATGTAGATATCTGA 1077 0.4271 MKVPSLLERLSAWDASIISQEGSAGQLSVDVRSSTVQLVFLTFGNVFAFSWFQIFELEPGLYKSIHDFVMRNMHGRFEVLGHSLYVDGDTQYREHHKSEWHKHNMKRKTRQLPPLTEEECVADLELGDSKSDLKDYFIFLCLWFGRVLEDNESWIKHDILSKRKKACVTFSIKNYCLNREHRISMALENCLRLTTVGMARPQCIHPFSSRGKLVVANFKGFKSTVSNPALKSTTGNYRRSRFICNAREAVDEVRVVTDSTWKNLVIASETPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIACYKLNTDDSPNIPTQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATLEKYVDI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1147 358 FunFam Thioredoxin 248 356 - -
Dere04g1147 358 Gene3D Glutaredoxin 253 357 - -
Dere04g1147 358 ProSiteProfiles Thioredoxin domain profile. 219 357 IPR013766 -
Dere04g1147 358 PANTHER GEO12009P1 234 356 - -
Dere04g1147 358 PRINTS Thioredoxin family signature 280 289 - -
Dere04g1147 358 PRINTS Thioredoxin family signature 272 280 - -
Dere04g1147 358 PRINTS Thioredoxin family signature 320 331 - -
Dere04g1147 358 SUPERFAMILY Thioredoxin-like 242 357 IPR036249 -
Dere04g1147 358 NCBIfam thioredoxin 257 355 IPR005746 GO:0015035
Dere04g1147 358 Pfam Thioredoxin 253 353 IPR013766 -
Dere04g1147 358 CDD TRX_family 265 353 - -
Dere04g1147 358 ProSitePatterns Thioredoxin family active site. 273 291 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1147 Dere-ChrDere04 12804742 12808612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1147 4 95 C2H2 Transcription Factor Family AT1G43860 32.632 1.05e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1147 04 12804742 12808612 Dere04g1147 04 12804742 12808612 ECH