Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1113 ATGGGCGGAGGTGGAACGACGCACGCGGAGGCGCAGTACTCCCTGGCGAAGATTTCAGTGTGGTGGGACATCGAGAACTGCCACGTCCCCAAAGGCTGCGATCCGCACGCCATCGCCCAGAACATTACCTCGGCACTGGTTCAAATGAGCTATGGTGGGCCCGTTTCCATCTCCGCCTACGGTGATACTACTCGCATCACGGCCTCTGTACAGCACGCTCTCTCCAGTACCGGAATCTCCCTCAACCATGTCCCAGCTGACTTCTCTAATGCTCTTCATCAATTGAGGATGAGGAGATATAATATTCTTCTTGCACAGCCTCAGAAAGCATCTACGCCCCTAGTTGCAGCTGTTAAGAGTGTATGGCTCTGGACTAGTCTCTTAGCTGGAGGACCTCCTTTAACTAATGGCGAATCACAACAATTTGCCCGAATATCCCCCCCAAGTGGATCTGCTCCAAATTTCATACGTGGCAGTCCTGATCAGCTATGGAGCAATAGCGGCAATCTGCCAGGCAATTCTCAGATTCCTTATTCACGGCCATTAAGACCCAACAGTTATCCACTGCAACCTGCTTTTGCACTGATCAATCAATATCCAACTAATTCCCAGTCTTTTGCAACTTCAGTAGTGCCTCCTAGGACTAGGGGGCCCAACTTCACCTCAGGACCACTTACAAGTGTGCCAGATATAGGTAATTTGAACATTTCTAGATTGACAAAACAGAATCCTAACAATAATGCTCCACATCCTGTAAGACATTAG 765 0.4928 MGGGGTTHAEAQYSLAKISVWWDIENCHVPKGCDPHAIAQNITSALVQMSYGGPVSISAYGDTTRITASVQHALSSTGISLNHVPADFSNALHQLRMRRYNILLAQPQKASTPLVAAVKSVWLWTSLLAGGPPLTNGESQQFARISPPSGSAPNFIRGSPDQLWSNSGNLPGNSQIPYSRPLRPNSYPLQPAFALINQYPTNSQSFATSVVPPRTRGPNFTSGPLTSVPDIGNLNISRLTKQNPNNNAPHPVRH 254
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1113 254 PANTHER LIMKAIN B LKAP 87 190 IPR024768 GO:0005777|GO:0010468
Dere04g1113 254 MobiDBLite consensus disorder prediction 208 229 - -
Dere04g1113 254 CDD PIN_limkain_b1_N_like 17 107 - -
Dere04g1113 254 Pfam NYN domain 17 86 IPR021139 GO:0004540
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g1113 Dere-ChrDere04 12295321 12297088 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1113 9 139 C2H2 Transcription Factor Family AT5G61190 56.364 2.60e-51 177