Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1109 ATGTTGCTAAGAGCAACAGCAGCTCTGAACCTTCAACTTCTTACTGTTGTTACAAAGGCGTGCATTGACAAGCTGACTGGAGAGGTTTTGGCCTGCAAATCAATTGCTAAAGATAGATTGGTTACTTCAGATGATCTGCGAAGTGTCAAACTAGAGATTGAGATAATGGCTAGGTTATCAGGGCACCCAAATGTTGCAGATCTCAAGGCAGTTTATGAAGAGGAGGATTTTGTTCATCTGGTGATGGAGCTTTGTGCTGGAGGTGAACTGTTTCACCGGCTGGAGAAGCATGGTCAATTTTCTGAATCTGAAGCTAGGGTTCTCTTCAGGCACCTCATGAAGGTGGTTCTGTATTTTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGAGCCTCCTCATCTCCAATTAAATTGGCAGATTTTGGGCTTGTAACCTACATCAAGCCTGGACAAAGTTTGCATGGGTTAGTAGGGAGTCCATTCTATATAGCTCCAGAGGTGCTTGCAGGTTCATATAACCAGGCTGTTGATGTTTGGAGTGCAGCTAAGGATTTGATTAAGGGAATGCTCTGCATAGAACCTTTTCGAAGGCTCACCGCCCAGCAGGTTTTAGATCATTGCTGGATGAAGAGTAATCAAACAAATCCTGAACAACTAAATGAACATAACGTCCAAAGTTGCGGGGAATCGGATGTTGGTGACAGCTCATTCTCTGTGTCCTTTATGACCAGGAGTCAGGACATCAGTTCTGGCGCTGAATCTCCTATATGTGATGCTCAGTCACCTACTTTCACATGCAGATCATCATTTTCTTCTTTTCTGGTGGAACCAGTGACTCCTTGTTCAGCTTTGGGTGGGTTTTCATTTCAGAGTCCTGGTGATTCTACTGGTTTGGAATTCTTTTCACCTGTTCCTTCAATGCCTAGCTTTGCATTTCTCAGCCCTAATTCTGTTGTTGAGAAAAGGAGTTGTACATTAGAGTTCTCAACCACTGCATCAAGTGTAAAGACAATTGCCGAAGATGCAAGCTTGGGGAAACTACTACTACCAGAATCAACCCTTTGTTTTGGACAAGACATTAAGCTAATGAATCGTAAGCCAGTGGAGACTAAAAGGGCAGGTGGTACAAATGGGCATAGGGTTTTGGGAATTCACAGCAAGAGAAACCGAACAATTGGACTTGGTGAAAGCGAGCAACTCGACCTTGTGGTGACCGAATCAGTCATTTGTTGGTCATCATGCACCCAACTCCCTACATCTCTTAGGTCATCTCTTGTCTCCTAA 1311 0.4363 MLLRATAALNLQLLTVVTKACIDKLTGEVLACKSIAKDRLVTSDDLRSVKLEIEIMARLSGHPNVADLKAVYEEEDFVHLVMELCAGGELFHRLEKHGQFSESEARVLFRHLMKVVLYFHENGVVHRDLKPENILLATRASSSPIKLADFGLVTYIKPGQSLHGLVGSPFYIAPEVLAGSYNQAVDVWSAAKDLIKGMLCIEPFRRLTAQQVLDHCWMKSNQTNPEQLNEHNVQSCGESDVGDSSFSVSFMTRSQDISSGAESPICDAQSPTFTCRSSFSSFLVEPVTPCSALGGFSFQSPGDSTGLEFFSPVPSMPSFAFLSPNSVVEKRSCTLEFSTTASSVKTIAEDASLGKLLLPESTLCFGQDIKLMNRKPVETKRAGGTNGHRVLGIHSKRNRTIGLGESEQLDLVVTESVICWSSCTQLPTSLRSSLVS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1109 436 Gene3D Phosphorylase Kinase; domain 1 15 89 - -
Dere04g1109 436 Pfam Protein kinase domain 19 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1109 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dere04g1109 436 ProSiteProfiles Protein kinase domain profile. 1 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1109 436 SMART serkin_6 11 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g1109 436 PANTHER SERINE/THREONINE-PROTEIN KINASE 190 233 - -
Dere04g1109 436 Gene3D Transferase(Phosphotransferase) domain 1 191 245 - -
Dere04g1109 436 Gene3D Transferase(Phosphotransferase) domain 1 90 190 - -
Dere04g1109 436 SUPERFAMILY Protein kinase-like (PK-like) 20 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1109 Dere-ChrDere04 12156818 12158367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1109 17 225 EF-hand Containing Proteins AT3G57530 42.688 2.38e-63 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere04g1109 Pkinase 3.1e-46 CL0016