Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere04g1098 | ATGGCTTCGTCATCGAATTCACCATGTGCTGCGTGTAAGTTTCTTCGGCGAAAGTGTCAACCGGAGTGCGTGTTTGCACCTTACTTCCCGCCCGATCAGCCTCAGAAATTCGCAAATGTGCACAAAGTATTCGGAGCGAGCAACGTCACCAAGCTTCTCAACGAGTTACACCCCCACCAACGGGAAGACGCAGTCAATTCCCTGGCCTACGAAGCGGACATGCGCCTCCGCGATCCCGTGTACGGCTGCGTCGGAGTCATCTCTCTCCTGCAACACCAACTCCGGCAGCTGCAAATGGACCTGACCTGCGCAAAGTCGGAGCTGTCCAGGTACCAGACCTTGGGTATCACCGGGCACGGCCTCATCGCGGCTCACCACCAGGGCCAAAACATGGGCATGAATCTCATCGGCGACCACCATTACCACCACCAGTTCTTTCCTCGGGACCACCATCAGCCACCCATGATTAGAAGCTTTGATGCCGGAAATAACTATGACGCTGGTCTCCTGTCCATGAATGTCTCCGCAAGCATAGGCCAGCTCAATCAGTTTCAGCATCAGCACCCGAGAGCTGCTGCCGGGGACGACCGTCGAACCATTGATCCCTCTTAG | 612 | 0.5588 | MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGITGHGLIAAHHQGQNMGMNLIGDHHYHHQFFPRDHHQPPMIRSFDAGNNYDAGLLSMNVSASIGQLNQFQHQHPRAAAGDDRRTIDPS | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere04g1098 | 203 | ProSiteProfiles | LOB domain profile. | 7 | 108 | IPR004883 | - | |
| Dere04g1098 | 203 | Coils | Coil | 87 | 114 | - | - | |
| Dere04g1098 | 203 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 5 | 152 | - | - | |
| Dere04g1098 | 203 | Pfam | Lateral organ boundaries (LOB) domain | 8 | 105 | IPR004883 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere04g1098 | Dere-ChrDere04 | 11771630 | 11772241 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere04g1098 | 2 | 203 | AS2 family | AT1G65620 | 71.296 | 1.16e-92 | 267 |
Transcription factors information