Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1061 ATGGCGACCCTACAGCAGCAGCAGCAACACCACCATGTCGGCGGTGGAAGCAAACGCATAGCAGCCGTCAACGCCACTCCTCCGTCTGCCACTAATGCTGACTCTAATCCCCAGAAGCCTGGGTGGAGGAAGTTTTTGTCATTTGTAGGTCCTGGTTTCCTGGTTTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAGGCTGGAGCTAACCACAGATATGAGCTGCTGTGGGTGATTCTCATTGGGCTAATCTTTGCCCTCATCATTCAGTCATTGGCTGCAAATCTCGGCGTAACCACCGGCAAACATCTTTCGGAATTATGTAAAGCTGAGTACCCATTGTTTGTCAAGTACTGCATGTGGTTGTTAGCAGAGGTTGCTGTCATAGCCGCAGACATACCCGAAGTGATTGGCACCGCCTTTGCTCTCAACATACTCTTTCATATCCCAGTATGGACAGGAGTTCTGTTGACTGGTTTGAGCACTCTCTTGCTTCTGGGTCTCCAGAGATTTGGGGTGAGGAAGCTGGAGCTGCTGATATCAGTGCTAGTATTTATAATGGCAGGATGTTTCTTTGGAGAAATGAGCCACGTGAAGCCTCCAGCGTCAGATGTAATAAGAGGAATGTTTGTCCCCAAACTCAGTGGTCAAGGAGCCACTGGGGATGCTATTGCCCTTCTGGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTCGTGCTCTCCAGAAAAGTGCCTAGTTCTGTGCGTGGCATCAATGACGCATGTAGATACTTCCTGATAGAGAGTGGGATCGCACTCTTCGTGGCATTTCTAATCAACGTTGCAGTAGTTTCTGTATCTGGCACTGTTTGTGCGGCCACCAACATGTCTGATGAAAACGCGAATAGATGCAACAATCTTACTCTCAACTCTGCTTCTTTCCTTCTCCAGAATGTTCTGGGACGATCCAGCTCAACTATTTATGCCATAGCACTGCTAGCCTCAGGACAAAGCTCTGCTATTACTGGCACCTATGCAGGGCAGTACATTATGCAGGGTTTCTTGGACCTCAAGATGAAAAAATGGATTAGGAATTTGGTGACCAGGGCTATAGCCATAACACCTAGTCTTATTGTCTCTATCATTGGTGGATCATCTGGAGCAGGACGACTTATCATCATTGCCTCGATGATACTTTCATTTGAGCTTCCATTCGCTCTGATACCACTTCTTAAGTTCAGCAGCAGCAGCACCAAGATGGGACCTCACAAGAATTCTATAATTATTATAGTCATATCATGGATCCTAGGGTTGGGGATCATGGGAATCAATATGTATTACCTCATTGCAGGGTTCGTGGGCTGGATAATTCATAGCACCCTACCAAAAGTGGCCAACGTGTTCATTGGGATCATAGTGTTTCCTCTAATGGCAGTGTATATTGTGGCAGTGGTATACCTAACCTTCAGAAAAGACACTGTCAAGACATATATTGAAACGAAGGACGACCCAATAGTACAAACCCACATGGAAAAGGGGTTCGTGAATTCTAATGGGCAAGTGGAGTTGGGTCATGTTCCATACAGAGAGGATTTAGCCGACATCCCATTACCAGAATAG 1623 0.4689 MATLQQQQQHHHVGGGSKRIAAVNATPPSATNADSNPQKPGWRKFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVTTGKHLSELCKAEYPLFVKYCMWLLAEVAVIAADIPEVIGTAFALNILFHIPVWTGVLLTGLSTLLLLGLQRFGVRKLELLISVLVFIMAGCFFGEMSHVKPPASDVIRGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGIALFVAFLINVAVVSVSGTVCAATNMSDENANRCNNLTLNSASFLLQNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKKWIRNLVTRAIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILGLGIMGINMYYLIAGFVGWIIHSTLPKVANVFIGIIVFPLMAVYIVAVVYLTFRKDTVKTYIETKDDPIVQTHMEKGFVNSNGQVELGHVPYREDLADIPLPE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1061 540 Pfam Natural resistance-associated macrophage protein 66 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PRINTS Natural resistance-associated macrophage protein signature 227 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PRINTS Natural resistance-associated macrophage protein signature 152 171 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PRINTS Natural resistance-associated macrophage protein signature 397 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PRINTS Natural resistance-associated macrophage protein signature 337 356 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PRINTS Natural resistance-associated macrophage protein signature 177 198 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PRINTS Natural resistance-associated macrophage protein signature 124 150 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PRINTS Natural resistance-associated macrophage protein signature 365 382 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 Hamap Divalent metal cation transporter MntH [mntH]. 32 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 31 497 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere04g1061 540 NCBIfam Nramp family divalent metal transporter 50 416 - -
Dere04g1061 540 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 43 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1061 Dere-ChrDere04 11364136 11368630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1061 25 540 Inorganic Solute Cotransporters AT1G15960 60.461 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1061 04 11364136 11368630 Dere04g1061 04 11364136 11368630 ECH