Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1060 ATGGCGCAATCGGAGAAGGTGGTGGTGGAGCGGCGGCGGTGGTGGATAGCACTGCTTTTAACGGCGGCTTTCGGCGCCGTCCACGGAGGCAATGTCACCTACGACGGTAGGTCATTGATCATCGACGGCCAACATAGAATTCTTTTCTCCGGTTCAATTCACTATCCTCGCAGCACTCCTCAGATGTGGCCTTCATTAATTGCAAAAGCCAAGGAGGGAGGAATAGATGTCATACAAACTTACGTGTTTTGGAACCTTCATGAGCCTCAACAAGGCCAGTATGACTTCAGTGGAAGGCGTGACATAGTGAAGTTCATTATGGAAATCCAAGCACAGGGGTTATATGCGACCCTCAGAATTGGACCATTCATTGAGAGTGAATGGACTTATGGAGGTTTACCCCTTTGGTTACATGACATTCCAGACATTGTTTTTAGATCAGATAATGAGCCATTCACGTATCACATGCAAAAGTTCACTACCAAAATAGTAAACATGATGAAATCAGCCAATCTTTATGCTTCACAAGGAGGGCCCATCATACTTTCACAGATCGAGAACGAGTATGGTATGGTTGAAGGGGCTTTTCACGAAAAAGGACCAGCATATGTTCGTTGGGCAGCTGAAATGGCTGTGGGGCTTCAAACTGGTGTGCCCTGGGTTATGTGCAAGCAAGATGATGCGCCTGATCCAGTGATTAACACGTGCAATGGCATGGAATGTGGGAAAACATTCAAGGGACCCAACTCGCCTAATAAGCCTTCACTCTGGACAGAGAACTGGACAAGTTTCTATCAAACCTTTGGTGAAGAACCATACTTGAGATCAGCGGAAGATATTGCGTATAATGTTGCCTTGTTTATTGCAAAGAATGGAAGCTATGTCAATTACTATATGTATCATGGAGGAACCAACTTCGAAAGAACAGCTTCTGCTTTTGTGATAACGGCTTATTATGATCAAGCTCCACTAGATGAATATGGTCTAATTAGGCAGCCAAAATATGACCATCTTAAGCAACTACATGCTGCAATTAAGTCATGTTCAAAACCTCTGCTTTCTACAACCCAGACAACACTCGACTTGGGCAAACAACAAGAAGCCTATGTTTTCAGAAAGAGCGCAACAGAATGTTCTGCTTTTCTGGAAAACAGAGATAATAAAGAAGTCACTGTCCAATTTGAAAGCATTCCCTATATAATACCCCCCAAATCAATTAGTATTCTACCAGATTGCAGGAATGTAGCCTTCAACACTGCCAAGGTAAGCACAGAATACAGTACCAGAACAATGAAACCTACAGTAGAGTTTAAATCAGCTGAACAATGGGAAGTGTACAAAGAAACCATCCCAAAATTTGGTGATACTACCTTAAAAGAAAACAAGCTTTTAGATCAGATCGGCACGGCAAAAGATACATCTGACTATTTGTGGTACACTTCCAGGTTTCAAGACAGTTCTTCAAGTTCTCAATCTATTCTTCGTGTGTTTAGCCACGGACATGTTCTGCATGCATTTGTCAACGGAGTTTTAAACAATATCAAATTGGAAAGTGGAGACAACAACATTTCCTTCCTCAGCGCAACAGTTGGAATGCCGGATTCAGGAGCACACCAAGAGCGCAAAGTTGCTGGTTTGCGTAATGTCAGAGTGGGTGACAGAGATTTCACTAATTACCCATGGGGATATCAGGTTGGGTTATTGGGAGAAAAATTGCAAATTTATACAGCTACTGGATCATGTAAAGTTCAGTGGGAAAGGTTTGAAAACTCCACCAATCCACTCACATGGTATCGGACCACATTTGATGCACCAGAAGGAAACGATCCAGTAGCAATTAACCTTGGTTCTATGGGAAAGGGTGAAGCTTGGGTTAATGGGCAGGCTATTGGCCGATACTGGGTATCTTTCCACACCCCAGAAGGCAATCCTTCACAGAAATGGTATCATATTCCTCGATCCCTCCTGCAACCTACTGGCAACCAACTGCTTCTATTTGAAGAAGAAACTGGGAACCCCCTTGGGATTTCTCTGGACACAGGTTATCACAAAATGTGTGCTTGCCTTGGTGCATTATCTGATGTACAGAGAGCCTGGAGGTCTAACAAAATAGATCCATGTTATCGGGCTTGTCTTGTTGATAACCTTGAGACTGGCGAAGACTGCGCTCCAGCTAGTGGTGAACGAAAGGGGAAAGCGAGTCCTTCCTTCCTTGCAAAGGACATTAGACGTAAGGAGACAGTCAAGGCTGCTTTCCTCTGCGCCTTCGCTTTGAAAGTTGAACTAAATGGAGGAAGTACAAAAGAGAATCTCGAATCAACAAGAGTACTTAAGCGCACTGTCAATCGTCCTCACTTATCCATTGTGAAAATTGTGGCTTGGGAGCAAGCCATTGAGCCTGAAGATAGCAAGGTTCAATTGCAAAATCCCACATTTTTGGAGAATGTGTAG 2451 0.4366 MAQSEKVVVERRRWWIALLLTAAFGAVHGGNVTYDGRSLIIDGQHRILFSGSIHYPRSTPQMWPSLIAKAKEGGIDVIQTYVFWNLHEPQQGQYDFSGRRDIVKFIMEIQAQGLYATLRIGPFIESEWTYGGLPLWLHDIPDIVFRSDNEPFTYHMQKFTTKIVNMMKSANLYASQGGPIILSQIENEYGMVEGAFHEKGPAYVRWAAEMAVGLQTGVPWVMCKQDDAPDPVINTCNGMECGKTFKGPNSPNKPSLWTENWTSFYQTFGEEPYLRSAEDIAYNVALFIAKNGSYVNYYMYHGGTNFERTASAFVITAYYDQAPLDEYGLIRQPKYDHLKQLHAAIKSCSKPLLSTTQTTLDLGKQQEAYVFRKSATECSAFLENRDNKEVTVQFESIPYIIPPKSISILPDCRNVAFNTAKVSTEYSTRTMKPTVEFKSAEQWEVYKETIPKFGDTTLKENKLLDQIGTAKDTSDYLWYTSRFQDSSSSSQSILRVFSHGHVLHAFVNGVLNNIKLESGDNNISFLSATVGMPDSGAHQERKVAGLRNVRVGDRDFTNYPWGYQVGLLGEKLQIYTATGSCKVQWERFENSTNPLTWYRTTFDAPEGNDPVAINLGSMGKGEAWVNGQAIGRYWVSFHTPEGNPSQKWYHIPRSLLQPTGNQLLLFEEETGNPLGISLDTGYHKMCACLGALSDVQRAWRSNKIDPCYRACLVDNLETGEDCAPASGERKGKASPSFLAKDIRRKETVKAAFLCAFALKVELNGGSTKENLESTRVLKRTVNRPHLSIVKIVAWEQAIEPEDSKVQLQNPTFLENV 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1060 816 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Dere04g1060 816 Gene3D - 569 681 - -
Dere04g1060 816 SUPERFAMILY (Trans)glycosidases 29 348 IPR017853 -
Dere04g1060 816 SUPERFAMILY Galactose-binding domain-like 561 681 IPR008979 -
Dere04g1060 816 Gene3D Glycosidases 30 349 - -
Dere04g1060 816 Pfam Beta-sandwich domain in beta galactosidase 352 422 IPR041392 -
Dere04g1060 816 FunFam Beta-galactosidase 563 686 - -
Dere04g1060 816 Pfam Glycosyl hydrolases family 35 38 344 IPR031330 -
Dere04g1060 816 FunFam Beta-galactosidase 28 349 - -
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 312 328 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 593 607 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 620 636 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 293 308 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 PANTHER BETA-GALACTOSIDASE RELATED 22 683 IPR001944 GO:0004553|GO:0005975
Dere04g1060 816 FunFam Beta-galactosidase 298 424 - -
Dere04g1060 816 SUPERFAMILY Galactose-binding domain-like 406 511 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1060 Dere-ChrDere04 11339174 11347923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1060 16 680 Glycoside Hydrolase AT5G63800 60.232 0.0 884