Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1057 ATGATCCAGCGCAAGTGGATCATCACGCTCACGCCTGCGTCTGATCCACCGTTGCCCCTGCGCCGATTATTTCAATCTCGACATCCAATCAACGCGCCGACTCCAAACTATTCCACGACTTTCATGTTCCTGGCCGCCGACGTAGTTCTCCTCCTAAGCTTCAGTGGGAGGGCGAAAGGTAAAGCTAGAAAGGTTGAAATGGCAGCAGAGCTACAGTTACCGCCAGGCTTCAGATTCCATCCGACGGACGACGAGCTTGTGATGCACTATCTCTGCCGTAAATCTGCGTCGCAGCCTATAGCCGTTCCGATCATCGCGGAAATCAACCTTTACAAGTACGATCCGTGGGACCTTCCCGGTAAGGCTTTGTATGGAGAGAAGGAGTGGTATTTCTTCTCACCAAGGGACCGGAAATATCCGAACGGTTCAAGACCGAACCGGGCAGCGGGGACCGGGTACTGGAAGGCAACCGGAGCGGATAAGCCCATTGGGCATCCGAAACCGGTCGGGATCAAGAAAGCTTTGGTTTTTTACGCAGGGAAAGCGCCAAAAGGGGAGAAAACCAATTGGATTATGCACGAGTATCGTCTCGCCGATGTGGATCGCTCTGCTCGCAGAAAGAACACCTTAAGGCTGGATGATTGGGTGCTTTGCCGAATATACAACAAGAAGGGCATTATTGAGAAACAACCAAGTGTTGGCAGCCGGAAAACTGAATGCTCGGAAATCGAGGACAAGAAGCCGGAGAATGTGACTCGCTGTGGCGCGCGTCCACCGCCTCCTCCTCATGCTGCGGTGACGGCTGATCACGTGTACTTTGACACGTCGGATTCAGTCCCAAAGCTGCACCCGGACTCGAGCTGCTCCGAGCACGTAGTCTCGCCAGAGTTCGCAAGCGAGGTGCAGAGCGAACCCAAGTTGAATGAGTGGGAAAAGAACCTTGAGTTTACATATAATTACGTGGGTGCCACCGCCAACAATGGCTTCGAGTCGCAATTAATCCAGAGCAATAATCAGATGTCGCCGTTGCAGGACATCTTCATGTACTTGCAGAAGCCTTTCTGA 1065 0.5268 MIQRKWIITLTPASDPPLPLRRLFQSRHPINAPTPNYSTTFMFLAADVVLLLSFSGRAKGKARKVEMAAELQLPPGFRFHPTDDELVMHYLCRKSASQPIAVPIIAEINLYKYDPWDLPGKALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARRKNTLRLDDWVLCRIYNKKGIIEKQPSVGSRKTECSEIEDKKPENVTRCGARPPPPPHAAVTADHVYFDTSDSVPKLHPDSSCSEHVVSPEFASEVQSEPKLNEWEKNLEFTYNYVGATANNGFESQLIQSNNQMSPLQDIFMYLQKPF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1057 354 FunFam NAC transcription factor 82 227 - -
Dere04g1057 354 PANTHER NAC TRANSCRIPTION FACTOR 56 72 275 - -
Dere04g1057 354 SUPERFAMILY NAC domain 67 223 IPR036093 GO:0003677|GO:0006355
Dere04g1057 354 Pfam No apical meristem (NAM) protein 74 197 IPR003441 GO:0003677|GO:0006355
Dere04g1057 354 ProSiteProfiles NAC domain profile. 73 223 IPR003441 GO:0003677|GO:0006355
Dere04g1057 354 Gene3D NAC domain 82 226 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1057 Dere-ChrDere04 11323334 11325360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1057 67 354 NAC Transcription Factor Family AT1G01720 71.000 1.56e-144 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere04g1057 NAM 3.4e-38 No_clan