Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1051 ATGTCGATTGAGGAGTCAAAGAAAGTAGTCGATGCAGAAGCGGCGTCGTTGCTTGTGGAGGAGCTGAGGGGCACCTTCGCTTCTGGCAGGACGCGAAGTTACGAGTGGAGAGTTTCGCAGTTGAAGGCCCTTTTGAAGTTGGTCGATGAACGTGAGCAACTGATTGTTGACGCTCTCCGCTCCGACCTCTGCAAGCCCCCGCTTGAAACCGTCGGCTACGAGATTGCTATGTTGAAAAATTCATGTAAAGTCACTCTGAAAGAACTAAAACACTGGATGAAGCCAGAAAAGGTCAAAACTTCAATCACTACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTAATCATCTCGGCATGGAATTATCCATTCTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTGCTTAAACCGTCAGAAATTGCTCCAGCCACATCATCGCTGCTGGCAAAATTGTTAGGGGAGTACATGGATAACTCATCTATAAAAGTTGTTGAGGGGGCAGTTGATGAAACATCTGCATTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATAGTGATGGCTGCTGCTGCAAAGCACCTTACACCAGTTGTTCTGGAGCTTGGAGGAAAATCTCCTGTTGTTGTTGATTCAGATATCAATTTACAAGTCGCAGCCAGACGGATAATTGCTGGCAAGTGGGCGTGCAACAATGGACAAGCCTGCATTTCTCCAGATTATATTATAACAACAAAAGACTTTGCCCCCAAGTTGATGGATGCCCTAAAGATTGAATTGGAGAAATTTTATGGAAAAAACCCATTAGAATCAAAAGATTTGTCCCGCATTGTGAATTCCAATCACTTTGCTCGCTTGACTAAGCTCTTGGAGGATGATAAGGTCGCTGGTAAGATTGTCTATGGAGGTGGAAAGGACGAAAGCAATTTGAGGATTGCTCCCACTATTTTATTGGACGTGCCTCGAAATTCTTTGATAATGAAGGAGGAGATATTTGGTCCTTTACTTCCCATTATCACGGTCAATAAATTGGAAGAAAGCTTCGATATGATTAATTCAGGAACAAAGCCCCTCGCGGCATATTTATTCACTAACAACAAGAAGATCAGGGAGCAGTTTGTGATGACTGTATCTGCGGGGGGTTTGGTTGTGAATGACACTACCGTACATCTCGCCACCCATACCCTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTTCATACCATGGGAAATTCTCCTTTGAAGCGTTTAGCCACAAAAAGGCAGTTTTATATCGCGGTTTCATAGGAGATGCATCGGTGAGGTACCCACCATACACAGACATGAAACTAAGATTGCTCAAGGCTTTGATAGGCGGTGGTGTACTTGGTATAATCCGTGCTATTTTTGGGCGGTCTTAG 1464 0.4454 MSIEESKKVVDAEAASLLVEELRGTFASGRTRSYEWRVSQLKALLKLVDEREQLIVDALRSDLCKPPLETVGYEIAMLKNSCKVTLKELKHWMKPEKVKTSITTFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDNSSIKVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSDINLQVAARRIIAGKWACNNGQACISPDYIITTKDFAPKLMDALKIELEKFYGKNPLESKDLSRIVNSNHFARLTKLLEDDKVAGKIVYGGGKDESNLRIAPTILLDVPRNSLIMKEEIFGPLLPIITVNKLEESFDMINSGTKPLAAYLFTNNKKIREQFVMTVSAGGLVVNDTTVHLATHTLPFGGVGESGMGSYHGKFSFEAFSHKKAVLYRGFIGDASVRYPPYTDMKLRLLKALIGGGVLGIIRAIFGRS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1051 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Dere04g1051 487 SUPERFAMILY ALDH-like 18 450 IPR016161 GO:0016491
Dere04g1051 487 FunFam Aldehyde dehydrogenase 224 424 - -
Dere04g1051 487 Pfam Aldehyde dehydrogenase family 13 444 IPR015590 GO:0016491
Dere04g1051 487 CDD ALDH_F3FHI 15 446 - -
Dere04g1051 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Dere04g1051 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Dere04g1051 487 PANTHER ALDEHYDE DEHYDROGENASE 14 474 IPR012394 GO:0006081
Dere04g1051 487 FunFam Aldehyde dehydrogenase 23 227 - -
Dere04g1051 487 PIRSF ALDH 3 477 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1051 Dere-ChrDere04 11254247 11259714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1051 3 487 Aldehyde Dehydrogenase Gene Family AT4G34240 66.598 0.0 662