Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1049 ATGGCAGAGCGTTTGTCGTTCACGCATTCACTGTCGTTGCCCTCTCAATCGTCTACTCCCAAAATGGCTGCTCTTGGTGGCGCCGCCGCCTCTTTTCGCATCATCATCCCCTCCGGCACCGGAGCGTCCAACTCTCTTGCGTCTTCCTCTCGTTACTTATCTTCCTCTTGTAGTTCCCTGTCCTTGCTCAAATGCTTTAGATCCTCTCCTCGCATTTCTCACCTATTTTTCAACCAGCGAAGGGCAGAGGTTCGATTATCAAGTGGAGAATATAGCACGGTGTCTGCGCCGAAGTCATTCGCGTCTAATCCTGATCAATTGAGGAGTGCAAGAGAAGATATCAAGGAGCTGCTTAAGACTAAGTTCTGCCATCCTATTCTGATCCGCTTGGGATGGCATGATGCTGGTACTTACAATAAAAGTATTGAGGAGTGGCCACAAAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAGTTGAGCTGAAACATGCAGCAAATGCTGGACTTGTTAATGCATTGAAGCTTCTTCAGCCAATCAAAGACAAGTACTCTGGTGTTACATATGCAGATTTATTTCAGCTGGCTGCTGCTACTGCTGTGGAGGAGGCTGGTGGCCCAAAAATCCCTATGAAGTATGGAAGAGTGGATGTTTCAGGACCTGAACAATGTCCTGAAGAAGGGAGACTTCCTGATGCTGGTCCCCCTTCTCCTGGTGATCATTTACGGCAAGTGTTTTACAGAATGGGTTTGAATGACAAGGAAATAGTTGCACTATCTGGTGCCCACACGCTGGGGCGGTCTAGACCAGAACGCAGTGGCTGGGGCAAGCCAGAGACCAAGTATACGAAAGATGGACCAGGAGCACCTGGGGGTCAATCGTGGACAGTGCAATGGTTGAAGTTTGACAATTCTTACTTCAAGGACATCAAAGAAAGAAAGGATGAAGATCTATTGGTCTTGCCGACTGATGCTGTTCTTTTTGAGGATCCATCATTCAAGGCATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCTAAGCTTAGCAATCTTGGAGCCAAATTTGATCCTCCAGAGGGTGTTGTGATAGATGGTGATTCTCCAAAAGCTGAGCCAGAAAAGTTTGTAGCAGCCAAATACTCGTCTGGAAAGGAATAA 1185 0.4667 MAERLSFTHSLSLPSQSSTPKMAALGGAAASFRIIIPSGTGASNSLASSSRYLSSSCSSLSLLKCFRSSPRISHLFFNQRRAEVRLSSGEYSTVSAPKSFASNPDQLRSAREDIKELLKTKFCHPILIRLGWHDAGTYNKSIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLAAATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPGDHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERKDEDLLVLPTDAVLFEDPSFKAYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGVVIDGDSPKAEPEKFVAAKYSSGKE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1049 394 PRINTS Plant ascorbate peroxidase signature 185 203 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Plant ascorbate peroxidase signature 124 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Plant ascorbate peroxidase signature 204 216 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Plant ascorbate peroxidase signature 103 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Plant ascorbate peroxidase signature 323 347 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 Gene3D Peroxidase, domain 2 232 355 - -
Dere04g1049 394 ProSitePatterns Peroxidases proximal heme-ligand signature. 254 264 IPR019793 -
Dere04g1049 394 MobiDBLite consensus disorder prediction 262 289 - -
Dere04g1049 394 Gene3D - 110 363 - -
Dere04g1049 394 MobiDBLite consensus disorder prediction 219 242 - -
Dere04g1049 394 Pfam Peroxidase 111 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Haem peroxidase superfamily signature 204 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Haem peroxidase superfamily signature 294 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 PRINTS Haem peroxidase superfamily signature 186 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 ProSiteProfiles Plant heme peroxidase family profile. 186 375 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 SUPERFAMILY Heme-dependent peroxidases 103 363 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere04g1049 394 CDD ascorbate_peroxidase 95 365 - -
Dere04g1049 394 FunFam L-ascorbate peroxidase T, chloroplastic 232 355 - -
Dere04g1049 394 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 110 234 - -
Dere04g1049 394 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 94 364 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1049 Dere-ChrDere04 11237411 11242987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1049 110 360 Peroxidase AT5G66390 29.492 5.23e-19 85.5