Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1048 ATGGAGGCTGAATCATCAGATGATTTGGTTATGGATAGCCAAAAGCAAGAGCAAGAGCATTTTCATGTGCTGGCAGTGGATGATAGTGTCATCGACAGGAAGCTTTTGGAAAGGCTCCTTACAGTTTCTTCATGCAAAGTGACCTGTGTGGACTCTGGGGACAAAGCTTTGGAATACCTTGGTCTGCTTGATGACCTTCATAATAATAATGCTTCCTCTACTTCCCAACCATCTTCTTCTCCCAATCAAGCACCACAACTCGAGGGAATTAAAGTGAATATGATCATGACAGACTACTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGACTCAAGGGATCCTCTTGGAAAGACATACCCGTCGTCATTATGTCATCAGAAAATGTACCTTCCAGAATCACCATGTGCTTGGAAGGCGGAGCAGAGGAGTTTCTATTGAAGCCTCTTCAATTATCAGATTTGAAGAAGCTTCAGCCCTACTTTCTGAAACCCCTCAACAATTCATGGGAACAAGAATCCATACCTACCGACAATGATAACAATCAAAGCAATAATGGTAATAACTATAATAATGTAGGCAAAAGGAAGGCGATGTCACCAGAAGCTACGGAGAGATCAAGACCCAAAATGAAAGGGTTGGAGGTGGTGTGA 657 0.4277 MEAESSDDLVMDSQKQEQEHFHVLAVDDSVIDRKLLERLLTVSSCKVTCVDSGDKALEYLGLLDDLHNNNASSTSQPSSSPNQAPQLEGIKVNMIMTDYCMPGMSGYDLLKRLKGSSWKDIPVVIMSSENVPSRITMCLEGGAEEFLLKPLQLSDLKKLQPYFLKPLNNSWEQESIPTDNDNNQSNNGNNYNNVGKRKAMSPEATERSRPKMKGLEVV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1048 218 Gene3D - 22 178 - -
Dere04g1048 218 MobiDBLite consensus disorder prediction 173 218 - -
Dere04g1048 218 SMART REC_2 21 160 IPR001789 GO:0000160
Dere04g1048 218 MobiDBLite consensus disorder prediction 173 196 - -
Dere04g1048 218 SUPERFAMILY CheY-like 21 160 IPR011006 -
Dere04g1048 218 Pfam Response regulator receiver domain 23 158 IPR001789 GO:0000160
Dere04g1048 218 ProSiteProfiles Response regulatory domain profile. 22 164 IPR001789 GO:0000160
Dere04g1048 218 CDD REC_typeA_ARR 23 159 - -
Dere04g1048 218 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 195 IPR045279 GO:0009736
Dere04g1048 218 MobiDBLite consensus disorder prediction 200 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1048 Dere-ChrDere04 11190883 11193068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1048 9 165 Response Regulator Gene Family AT2G41310 57.862 4.82e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere04g1048 Response_reg 4.4e-17 CL0304