Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1041 ATGAAAAGAAGAAAAGGACAAAAGACTCAACACCGAGAGGATAGAGAAGATATCTTGGCCCATCCGAGGTGGCAAGGTCCGGGTCCCACTGCTATTAGGTACTATGAGAGCACTAGAGAGCATGTGGAAGAACGAGACTGTCAGCTGCGGCCCGCCATGAACGCCATAGCAACTGCTGCAGCTCTCTCTTTGCCCATCTCCTTTTGTAGACCAGCCAAGCTTGACTCCAAAAAGGGTTTGAAAGGCAGATTTAGAGTGTTCGCTGTATTTGGAGAAGAGCTGGAGAAGAAAAATGTCTGGGATGCGCTCTTTGATGTGGAGGATCCGAGATCTAAAGTTCCACAAAACAAAGGAAAGTTTTCGGATATATATCAAGCCCTAGAAGTGGCTAGATATGATATTCAGTACTGTGATTGGCGGGCTCGTCAGGATGTGCTCGCCATCATGCTCCTCCATGAAAAGGTCGTGGAAGTTCTCAATCCTCTAGCTCGTGAGTATAAATCAATTGGTACCATGAAAAAGGAGCTAGCAGAGTTGCAGGAAGAATTAGCACAAGCACACAGACAGGTTCATATATCTGAAGCAAGGGTTGGGACAGCTTTAGATAAACTAGCTTATATGGAAGCATTGGTGAATGATCGGCTGTTGCAAGACCATACTGCAGTTGACCAGACATCCTCTTCTCCAAGTACTTGTGTGCAGTCTGTGGAAATTGGAAAGAGAAGGTTGCCGCGGAAAAGCCTGAATGTATCAGGTCCAGTTGAGTCCTATCATCCCCGCATGAAGAACTTCTGGTATCCTATTGCTTTCTCCTCTGACTTGAAGGATGACACCATGATCCCCATAGAATGTTTTGAAGAACCATGGGTAATCTTTAGAGGGAAAGATGGGAAACCTGGATGTGTACAGAATACCTGTGCACATAGAGCGTGTCCTCTGCACCTTGGTTCTGTAAATGAGGGTCGTATTCAATGCCCCTATCATGGCTGGGAATATTCAACCAATGGGAAATGTGAGAAAATGCCATCAACTCGAATGCTAAATGTAAAGATAAAGTCATTGCCATGCTTTGAAAAGGATGGGATGATCTGGATATGGCCGGGCAATGAGCCACCAACTGCCACCCTTCCATCTTTACTACCTCCATCTGGGTTTGAAATCCATGCTGAGATTGTCATAGAGCTCCCAGTAGAACATGGATTACTTTTGGACAATCTTTTGGATCTTGCACATGCCCCTTTTACTCACACTTCAACCTTTGCCAAAGGGTGGAGCGTTCCAAGCTTGGTGAAATTTTTGACACCAGCATCTGGGTTGCAAGGATACTGGGACCCCTATCCAATAGATATGGAGTTTCGACCGCCTTGCATGGTTCTATCAACCATCGGTATTTCAAAGCCTGGAAAACTTGAGGGTCAAAACACCAAGCAGTGTGCCACACACCTGCACCAACTCCATGTCTGCTTACCATCATCGAAACAAAAAACAAGATTACTATACAGAATGTCGTTGGATTTTGCTCCTCTGCTTAAGCACGTTCCTTTTATGCAGTATCTATGGAGGCATTTTGCGGAACAGGTTTTAAATGAGGATCTAAGGCTGGTGGTGGGACAGCAAGAGAGGATGAACAAAGGTGCAAATGTATGGAATTTCCCAGTATCTTATGACAAGCTTGGTGTAAGGTACAGACTATGGAGAGACTCTTTGGAACGAGGAGCTAAGCAACTACCCTTCACCAAATAG 1743 0.4521 MKRRKGQKTQHREDREDILAHPRWQGPGPTAIRYYESTREHVEERDCQLRPAMNAIATAAALSLPISFCRPAKLDSKKGLKGRFRVFAVFGEELEKKNVWDALFDVEDPRSKVPQNKGKFSDIYQALEVARYDIQYCDWRARQDVLAIMLLHEKVVEVLNPLAREYKSIGTMKKELAELQEELAQAHRQVHISEARVGTALDKLAYMEALVNDRLLQDHTAVDQTSSSPSTCVQSVEIGKRRLPRKSLNVSGPVESYHPRMKNFWYPIAFSSDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTNGKCEKMPSTRMLNVKIKSLPCFEKDGMIWIWPGNEPPTATLPSLLPPSGFEIHAEIVIELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTKQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHVPFMQYLWRHFAEQVLNEDLRLVVGQQERMNKGANVWNFPVSYDKLGVRYRLWRDSLERGAKQLPFTK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1041 580 Gene3D - 388 575 - -
Dere04g1041 580 Gene3D - 259 381 IPR036922 GO:0051537
Dere04g1041 580 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 154 568 - -
Dere04g1041 580 SUPERFAMILY Bet v1-like 361 572 - -
Dere04g1041 580 SUPERFAMILY ISP domain 261 369 IPR036922 GO:0051537
Dere04g1041 580 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 265 365 IPR017941 GO:0051537
Dere04g1041 580 Coils Coil 162 196 - -
Dere04g1041 580 Pfam Vanillate O-demethylase oxygenase C-terminal domain 398 422 IPR044043 GO:0016491
Dere04g1041 580 Pfam Rieske [2Fe-2S] domain 265 347 IPR017941 GO:0051537
Dere04g1041 580 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 306 328 IPR015881 GO:0005506|GO:0051537
Dere04g1041 580 MobiDBLite consensus disorder prediction 1 23 - -
Dere04g1041 580 Pfam Pheophorbide a oxygenase 452 547 IPR013626 GO:0010277
Dere04g1041 580 CDD Rieske_RO_Alpha_Cao 248 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1041 Dere-ChrDere04 11102205 11106864 Dispersed/Wgd