Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1024 ATGGGAGATCATCAGGAAGTGGGAAGTGCTAAGATGAGCCAGGTGTTGCGCAAGTTGAAGCCATACCTTGCTATGGTGTCCCTTCAATTTGGGTACTCAGGCATGTATATCATCACCATGGTTTCTTTCAAGCATGGTATGAGCCACTGGATTCTCTCTGTCTACCGTCACGTAGTCGCCCTTCTTATCATGGCCCCTTTTGCTCTCGTCCTTGAAAGAAAAATAAGGCCTCGGATGACTCTTCCTATCTTCCTCCGGATAGTGGTGCTTGGTTTCCTTGAGCCAGTGCTGGATCAAAATTTGTACAACATGGGAATGAAGTACACCTCAACAACTTTTGCATCTGCCTCTGTTAATGTCCTCCCAGCCATAACTTTTCTGATGGCACTCGTTTTCAGGTTAGAGAAAGTGAACCTGAAAAAATTTCATAGCGTGGCCAAGATAATAGGAACTGCAGTAACAGTGTCAGGAGCCATGGTTATGACTTTGTACAAAGGCAAAGCCTTTCAGATCATAAAGGCCAGTACGGGGAGCCACCACGATGCTGCATCCACAGAACCCTCTGACCAGCACTGGGTGCTTGGCACCGTTTGCCTCATTGCAAGTTGCGGTGGCTGGGCTGCCTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTCTCGCTCACAGCTTGGATTTGCCTGATGGGTATTATTGAGGGTTCAATTGCATCCTTAATAATGGAAAGGGACTTTAGCGTCTGGGCCATAGGCTGGGACTCCAGGCTCCTCGCTTGTGTTTATTCTGGGGTGGTGTGCTCTGGAATGGCTTACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCAGTGTTTGTGACTTCCTTCAGCCCACTATGTATGATTATTACTGCTGCATTGGGTTCCCTTGTTTTAGCTGAGAAAGTTCATGTGGGAAGCATAATTGGAGCAATTCTCATTGTGTTCGGACTTTACACTGTGGTCTGGGGAAAAAGCAAAGACCGTAAAAACACAACAGAAACAGAGAAAGGGGAAGGGCATGAATTGCCAATAAAGGACGATACAAGGTCAGGATCAGACATTTTTGACAGCATTGTCAGTGTTCCTGCTGAGAAGTTGAAGGGTCCAGCCGAGAAGAACAATGTCCCACCACCACCAAGATCATGA 1179 0.4682 MGDHQEVGSAKMSQVLRKLKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVALLIMAPFALVLERKIRPRMTLPIFLRIVVLGFLEPVLDQNLYNMGMKYTSTTFASASVNVLPAITFLMALVFRLEKVNLKKFHSVAKIIGTAVTVSGAMVMTLYKGKAFQIIKASTGSHHDAASTEPSDQHWVLGTVCLIASCGGWAAFFILQSFTLKKYPAELSLTAWICLMGIIEGSIASLIMERDFSVWAIGWDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEKVHVGSIIGAILIVFGLYTVVWGKSKDRKNTTETEKGEGHELPIKDDTRSGSDIFDSIVSVPAEKLKGPAEKNNVPPPPRS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1024 392 MobiDBLite consensus disorder prediction 373 392 - -
Dere04g1024 392 MobiDBLite consensus disorder prediction 339 364 - -
Dere04g1024 392 Pfam EamA-like transporter family 33 154 IPR000620 GO:0016020
Dere04g1024 392 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020
Dere04g1024 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
Dere04g1024 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 337 - -
Dere04g1024 392 PANTHER WAT1-RELATED PROTEIN 21 343 IPR030184 GO:0016020|GO:0022857
Dere04g1024 392 MobiDBLite consensus disorder prediction 339 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1024 Dere-ChrDere04 10948996 10951807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1024 16 359 Nodulin-like Gene Family AT4G08300 67.147 2.21e-171 481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1024 04 10948996 10951807 Dere04g1024 04 10948996 10951807 ECH