Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1020 ATGGGAGAGGGAAGGTGTGGGAAGTTAGGTTCAATGCTGAAATCTGCACAACCTTATTTGCTAATGATCGCCATGCAGCTTGGGGCTGCTGGAATGTACGTCTTCACCATGTCTACCTTTAGCAAAGGCATGAGTCGCTATGTTTACGTGGTGTACCGCAATGCCACGGCTTCTCTTGCTATCGCTCCTTTTGCATTCTTTCTCGAGAAGAAAGTTAGGCCAAGAATGACATTCCCTGTCTTCTGGAGGATATTGCTGCTGGGGTTTCTAGAGGTTATAATGGATCAAGAGTTCTCTTCTTTGGGGATGGTGTACACATCGGCATCGTTTACAACCGCCATTTTGAATGCCACACCAGCCGTCACCTTTCTCATTGCTGTCGTTCTAAGGATAGAGCGTGTGAGGATTAAGGAGGTAAGGAGTCAAGCCAAAGCAATTGGAACTGTACTAAGCTTTGGAGGTGCCCTGGTCATGGCTCTCTACAAAGGCCCCATTCTTAATGTATTGGGGTCGTCCAACGACAGCGAACAACACGAAAGTAACACCAACTCCTCCGGCCATAGTCAAATCCTGGGGACGCTTTTTCTCTTCGTATCTTGTGTCTCCTTTGCTTCTTTCTACGTACTTCAGTCCATGGTGCTGAAGATATATCCAGCGCCGATGTCCCTCATTAGCTTGGTATGTTTTTTTGGAGCAATACAAGCGCTAGCTGTAGCACTTGGGATCGAGCGTCACGCTCATGCCTGGGCTGTCGGCTGGGATTCCAGGCTGTTCGCTCCCTTATATGCGGGAGTGGTAGCCACAGGAGTGATGTACTCTGTGCAAGGGTTGGTGATGCGAAGCAGAGGCCCTGTATTTGTAACAGCTTTCAACCCTCTGCTTATGATTATGGGGACTATTTTGGGCGTCGCCCTTCTGGGCGAGAAGCTTTACCTTGGAAGTATTATTGGAAGCCTTATCGTCGTAATTGGACTGTATGCTGTTGTATGGGGCAAGAGCAAGGATGGTATTGAGAACGAGTGCACAGGAGAGGAGACAAAGGGAGATCCTGAATCTCAGCAACAGCTTCCAGTAACTATGCCACCCTCTTCCGAAGCCCAACATTTGCAAATGGAATCTACGGACAAACCCAGTCACAACTGA 1143 0.4847 MGEGRCGKLGSMLKSAQPYLLMIAMQLGAAGMYVFTMSTFSKGMSRYVYVVYRNATASLAIAPFAFFLEKKVRPRMTFPVFWRILLLGFLEVIMDQEFSSLGMVYTSASFTTAILNATPAVTFLIAVVLRIERVRIKEVRSQAKAIGTVLSFGGALVMALYKGPILNVLGSSNDSEQHESNTNSSGHSQILGTLFLFVSCVSFASFYVLQSMVLKIYPAPMSLISLVCFFGAIQALAVALGIERHAHAWAVGWDSRLFAPLYAGVVATGVMYSVQGLVMRSRGPVFVTAFNPLLMIMGTILGVALLGEKLYLGSIIGSLIVVIGLYAVVWGKSKDGIENECTGEETKGDPESQQQLPVTMPPSSEAQHLQMESTDKPSHN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1020 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Dere04g1020 380 MobiDBLite consensus disorder prediction 338 380 - -
Dere04g1020 380 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Dere04g1020 380 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020
Dere04g1020 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 333 - -
Dere04g1020 380 PANTHER WAT1-RELATED PROTEIN 17 336 IPR030184 GO:0016020|GO:0022857
Dere04g1020 380 MobiDBLite consensus disorder prediction 348 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1020 Dere-ChrDere04 10899981 10901706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1020 8 359 Nodulin-like Gene Family AT1G44800 44.602 4.12e-108 320