Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1019 ATGGAAAAAGGATGTGGTGGGAGTGTGGGGAGAGTGGTGAGGAAGGCAAAGCCATATTTGATAGTGGTGGGATTGCAGTTCGGGATCGCAGGAACAGTGCTGTTCGGCATGACGAGTGTGAAGCACGGAGTGAATCGTTTTGTGTACAGTGCGTACCGCAACGCATTTGCTGCACTTAGCCTCGCTCCTTTTGCTTTCTTCCTTGAAAGGAAAGTTAGACCGACGATGACAATCACTGTATTTTTACAGATAATGGTTCTCGGCTTTCTGGAGCCAGTAATTGACCAAGGCTTTAGTTTCATGGGGATGCAGTACACTTCGGCTACTTTCACATCTGCTATTCTGAATACCGTGCCCTCTATCACCTTCTTACTCGCAGTCATCTTTAGGTTAGAGCGTGTAAAGATGAAGGAGGCAGGGAGCAAAGCGAAGGTGATAGGAACAATGGTATCATTTGGAGGGGCATTACTAATGACACTGTACAAAGGTCCCATAATACACCTACTCGATTCTAAGAATCCAAGGATGCAGCATCAGCAAGTGGAAACCCACTCCCCTCACAAACACTGGATCATAGGCGCGCTTTTCATACTCTTGGGTTGTGCTGCTTGGTCATCTTTCTTCATTTTGCAGTCGATAACGTTGAAGAAGTACCCAGCAGAATTGTCACTGGCATGCTTGATATGCTTGACGGGTGCTTTGCAAAGTGGATCAGTGGCTCTGGTGTCGGAGCATCACGCTGGTGCGTGGTCTCTTGGTTGGGACTACAGGCTCTTTTCTCCTCTCTACGCGGGAATAGTTGGGTCGGGAATAGCGTATTACCTGCAAGGATTGGTGTTGCAAACCAAAGGCCCAGTGTTTGTGACGGCCTTTAACCCACTTTGCATGGTCATCGTTGCTGCTTTGGGCTCCATCGCTCTATCAGAACAACTCCACCTCGGAAGTATAATTGGGGGGATGATAATCGCGGTGGGTCTGTACTGTGTTGTGTGGGGAAAGGGCAAAGATGAGTCAGACGTCACTGCAGCAACAGCAAAGGAATCGACACAAGAGCTGCCAGTGACCTCAATTGCAATATCCACAGTGGAGAATGCTGAGAAAACCGTTTGTCACCAAAGCACCAACTAA 1128 0.4823 MEKGCGGSVGRVVRKAKPYLIVVGLQFGIAGTVLFGMTSVKHGVNRFVYSAYRNAFAALSLAPFAFFLERKVRPTMTITVFLQIMVLGFLEPVIDQGFSFMGMQYTSATFTSAILNTVPSITFLLAVIFRLERVKMKEAGSKAKVIGTMVSFGGALLMTLYKGPIIHLLDSKNPRMQHQQVETHSPHKHWIIGALFILLGCAAWSSFFILQSITLKKYPAELSLACLICLTGALQSGSVALVSEHHAGAWSLGWDYRLFSPLYAGIVGSGIAYYLQGLVLQTKGPVFVTAFNPLCMVIVAALGSIALSEQLHLGSIIGGMIIAVGLYCVVWGKGKDESDVTAATAKESTQELPVTSIAISTVENAEKTVCHQSTN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1019 375 PANTHER WAT1-RELATED PROTEIN 18 345 IPR030184 GO:0016020|GO:0022857
Dere04g1019 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Dere04g1019 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
Dere04g1019 375 Pfam EamA-like transporter family 32 159 IPR000620 GO:0016020
Dere04g1019 375 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1019 Dere-ChrDere04 10884473 10887283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1019 10 356 Nodulin-like Gene Family AT4G08300 46.418 3.63e-115 338