Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0989 ATGAGTAAACCCAGAACCCAAAGGAAACCCTCCAACCATGTCAACCAAAACCATAATTTACAGCCTCAGAAAGCAGAGAAACAAGCCTCATGGCCACTGATTAGAGGCCTATTGGCTTGTAGACATGTCCAACTTCAACAGCAGCAGAAGCAGCAGGAAGTGAAACAACCAAAGCAGAAACTAGTGCAGAGAAAGCTACAAGAAGAGGAGGAAAGAGTTCCAGAAGAAAGCAGCAAGAAATGCAAGAAAATGAGATGTTCAGGTTCACTTTGTAACAACACCAAGGTCATGGCAAGGCCTGAAGCAGGGTCCCCTGACATGCACAAGACCAAAAGGGTGTCGCTGGGTGCATGTTACTCTAGTAACAATGATGCTTCCAATTCTAACAGGTCCATGAAAGCTCCTCTACATGAGCTCAATGGGGTGGTTGTGTCTGCCTCTTCTTCTTCTCATTCTCAGTCAATATCTTCTAATACATCTGTGAGTGGGTCTTCTAGGGGAGTGCCATTCAGGAGGCTCTCTGGTTGTTACGAGTGTCGAATGGTGGTTGACCCTCTTCTTGGTTTCACCAGAGACCCTTCTCTCAGGAGTAGCATTTGCCCTTGCCCACACTGTGGCGAGATCTTCATGAAGCCAGAAAATTTAGAGCTTCATCAGGCTGTCAAACATGCAGTATCTGAACTGGGACCAGAAGATACGAGCAAGAACATAGTGGAAATTATATTCCACTCAAGTTGGCTGAAGAAACAATCTCCAGTCTGCAAAATAGACCGCATCCTTAAAGTCCACAACACCCAGAAGACAATAACCAAATTCGAAGAGTACAGAGAGTCCATCAAAGCCAAAGCCACAAAGCTTCCCAAGAAGCACTCTCGTTGCATAGCAGACGGAAACGAACTACTGAGGTTCCATTGCACGACCTCTGTGTGTTCACTGGGCCTAAAAGGATCCTCCAACCTCTGTAACTCAATCCCACAATGCAGTGTGTGTAGCATAATCAAGAATGGCTTCAAGGTGGTCGCTGGAGGAAAGGGAATATTGACGACGGCGACAAGCGGGAAGGCACACGACAAAGCCGAGGTTTCAGATGATGAGATTAATAAGGAGAAGAGGGCAATGTTGGTATGCAGGGTGATAGCAGGGAGGGTGAAGAAGAACATGGAAGGAGGAGGGAGTATGAGTATGGAGGAGTATGACTCGCTTGCAGGGGAAGTTGGGGCTTATTCCAATTTGGAAGAGTTGTATGTGTTCAACCATAGAGCTATTTTGCCTTGCTTTGTTGTATTCTATACTGGTTTTTGA 1302 0.4608 MSKPRTQRKPSNHVNQNHNLQPQKAEKQASWPLIRGLLACRHVQLQQQQKQQEVKQPKQKLVQRKLQEEEERVPEESSKKCKKMRCSGSLCNNTKVMARPEAGSPDMHKTKRVSLGACYSSNNDASNSNRSMKAPLHELNGVVVSASSSSHSQSISSNTSVSGSSRGVPFRRLSGCYECRMVVDPLLGFTRDPSLRSSICPCPHCGEIFMKPENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITKFEEYRESIKAKATKLPKKHSRCIADGNELLRFHCTTSVCSLGLKGSSNLCNSIPQCSVCSIIKNGFKVVAGGKGILTTATSGKAHDKAEVSDDEINKEKRAMLVCRVIAGRVKKNMEGGGSMSMEEYDSLAGEVGAYSNLEELYVFNHRAILPCFVVFYTGF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0989 433 MobiDBLite consensus disorder prediction 7 26 - -
Dere04g0989 433 ProSiteProfiles Zinc finger C2H2 type domain profile. 200 228 IPR013087 -
Dere04g0989 433 FunFam C2H2-like zinc finger protein 224 431 - -
Dere04g0989 433 SUPERFAMILY ADP-ribosylation 225 432 - -
Dere04g0989 433 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 81 430 - -
Dere04g0989 433 MobiDBLite consensus disorder prediction 1 28 - -
Dere04g0989 433 ProSitePatterns Zinc finger C2H2 type domain signature. 200 223 IPR013087 -
Dere04g0989 433 Gene3D - 224 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0989 Dere-ChrDere04 10481008 10482528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0989 166 430 C2H2 Transcription Factor Family AT1G75710 53.082 1.74e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere04g0989 None None None