Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0981 ATGGCTGCCTCCGTCGATAACCGCCAATACTCTCGCCTCCAACATCCCTTGAACGGCGTCGTTTGCACCGTCTTCCCCAACAGCACCTCCCAGCAACATTACGATGATATCGATTTCTATTCCGATTCCTCCAGCGAAGACGAAATTGACACTGACGACTTGCAACACCTCTTCCCAAACGCTAACCTTCAACTCGAGCCCTCTCTCATCGACCCTCGCGACCAAGCTACTGCTGACAACTGGATCCCTCGCAACGCTTCCCTGGTCCGTCTCACAGGCAAGCATCCCTTCAACTCCGAGCCACCCTTGAACCGCCTCATGCACCACGGCTTCATCACCCCGGTCCCACTTCACTACGTCCGCAACCACGGTCCAGTTCCAAAGGCCCGATGGGACGACTGGACAGTGGAGGTGTGTGGGCTCGTAAAGCAACCCTTCCTCCTCAACATGGACCAACTGGTCAACGAATTCCCCCGCCGTGAGTTCCCCGTGACGCTGGTCTGCGCCGGCAACCGCCGTAAGGAACAGAACATGGTGAAGCAGAGCATCGGCTTTAACTGGGGGGCGGCTGCGGTTTCTACTTCGGTGTGGCGAGGTGTACTGTTGAGGCACGTGCTCAAGCGGTGTGGCATCCATGGCCGAGCGAAAGGGGCCCTGCACGTGTGCTTTGAAGGGGCTGAGGATTTGCCAGGTGGCGGGGGGTCCAAGTACGGGACTAGCATCAGTAGGGAGATAGCACTGGATCCCTCCCGTGACATCATTCTGGCGTACATGCAAAACGGGGAGCTTTTGGCGCCGGATCACGGCTTCCCAGTTAGGGTCATCATACCCGGTTTCATTGGCGGCCGTATGGTGAAATGGCTGAAGCGTATCGTGGTATCTAACCAACAATCCCAGAGTTATTACCACTACAAGGACAATAGGGTGCTTCCCTCTCACGTTGATGCTGAGCTTGCTAATTCACAAGATTGGTGGTATAAGCCGGAATATATTATCAACGAGCTGAACATCAACTCCGTTATAACGACGCCGAGTCACGAGGAGATCCTGCCCATAAACTCGTGGACTACACAGAGACCTTATGTGTTGAGAGGATACGCGTATTCCGGGGGAGGGAGGAAAGTGACACGTGTCGAGGTGACGATGGACGGTGGGGAAACGTGGCAAGTGTGCAGGGTGGAGCACCCAGAGAAACCCAACAAGTACGGCAAGTACTGGTGCTGGTGCTTCTGGAGCTTGGAGGTGGAAGTGCTCAACCTACTTGCAGCCAAAGAGGTTGCAGTGCGAGCCTGGGATGAAGCCCACAACACCCAACCCCAAAAACTCATTTGGAATCTTATGGGAATGATGAACAACTGCTGGTTCAGGGTAAAAATCAATATGTGCAAGCCCCATAAGGGTGAGATTGGCATTGTGTTTGAGCACCCAGCCTTACCAGGCAACCAATCCGGTGGCTGGATGGATAAGGAAAGACATCTCCAGCAGTCATCGGAGTCCAACCAAACCCTCAAAAAGAGTGTCTCAACCCCTTTCATGAATACTTCCTCCAATGTCTATTCCCTGTCTCAAATCAAAACCCACACCACCCCCGAATCTGCCTGGATCGTCATTCACGGTCAAGTCTACGACTGCACTCGCTTCCTCAAGCTCCACCCCGGCGGAGCCGACAGCATCCTCATCAACGCCGGCACCGACTGTACCGAGGAGTTCGATGCCATCCATTCTGACAAAGCCAAGAAAATGCTAGAGGAATACCGGGTCGGCGAGCTCATGACCACCGGTTACACCTCCGACTCGTCCACTTCCTCCCCCAATAACTCCGTGCATGGCAATTCCAACACCACCCACTCGTTGGCCCCAATCAAGGAAGTCACGCCATCGCCACGTGGCGTGGCTCTTAACCCACGTGAAAAAATCCCATGCAAGCTCGTCTCCAAGACCTCCCTCTCCCACGACGTTAGGCTCTTCCGTTTTGCGCTACCCTCTGAGGAACAAGTCCTGGGTTTGCCAGTAGGAAAGCACATATTCTTATGCACTACCATTGATGGTAAGCTATGCATGCGAGCTTACACTCCAACGAGCAGCGTTGATGAAGTGGGTTACTTAGATTTAGTGATCAAGATTTACTTCAAAGGCGTTCATCCCAAGTTCCCTAACGGTGGCCTCATGTCTCAGCACTTGGACTCGTTGCCTATAGGCTCGATCTTGGACGTGAAGGGTCCCTTGGGTCACATCGAGTACACCGGTAGAGGCAACTTCTTGGTTCACGGAAAACACAAGTTCGCGAAGAAACTAGCCATGTTTGCAGGCGGGACTGGTATCACACCCATTTATCAAGTGGCTCAAGCAATTCTGAAGGACCCAGAGGACGAGACCGAAATGCACGTGGTGTACGCGAACCGGACGGACGATGATATATTGGTAAGAGGGGAGCTGGATGCGTGGGCTGAGAAGTATGGCGAGCGGTTCAAGGTGTGGTACGTGGTACAGGAAACCAAAAGGGTAGGTTGGGAATACAGTGTGGGGTTCATCACGGAGAGCGTGATGAGGGAACATGTTCCTGCAGCATCCGAGGAAACATTGGCATTGGCCTGTGGGGCACCCCCAATGATTCAGTTTGCTGTGCAGCCGAATTTGGAGAAGATAGGGTATGACATCAACAATAATTTGCTTGTGTTTTAG 2682 0.5328 MAASVDNRQYSRLQHPLNGVVCTVFPNSTSQQHYDDIDFYSDSSSEDEIDTDDLQHLFPNANLQLEPSLIDPRDQATADNWIPRNASLVRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGPVPKARWDDWTVEVCGLVKQPFLLNMDQLVNEFPRREFPVTLVCAGNRRKEQNMVKQSIGFNWGAAAVSTSVWRGVLLRHVLKRCGIHGRAKGALHVCFEGAEDLPGGGGSKYGTSISREIALDPSRDIILAYMQNGELLAPDHGFPVRVIIPGFIGGRMVKWLKRIVVSNQQSQSYYHYKDNRVLPSHVDAELANSQDWWYKPEYIINELNINSVITTPSHEEILPINSWTTQRPYVLRGYAYSGGGRKVTRVEVTMDGGETWQVCRVEHPEKPNKYGKYWCWCFWSLEVEVLNLLAAKEVAVRAWDEAHNTQPQKLIWNLMGMMNNCWFRVKINMCKPHKGEIGIVFEHPALPGNQSGGWMDKERHLQQSSESNQTLKKSVSTPFMNTSSNVYSLSQIKTHTTPESAWIVIHGQVYDCTRFLKLHPGGADSILINAGTDCTEEFDAIHSDKAKKMLEEYRVGELMTTGYTSDSSTSSPNNSVHGNSNTTHSLAPIKEVTPSPRGVALNPREKIPCKLVSKTSLSHDVRLFRFALPSEEQVLGLPVGKHIFLCTTIDGKLCMRAYTPTSSVDEVGYLDLVIKIYFKGVHPKFPNGGLMSQHLDSLPIGSILDVKGPLGHIEYTGRGNFLVHGKHKFAKKLAMFAGGTGITPIYQVAQAILKDPEDETEMHVVYANRTDDDILVRGELDAWAEKYGERFKVWYVVQETKRVGWEYSVGFITESVMREHVPAASEETLALACGAPPMIQFAVQPNLEKIGYDINNNLLVF 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0981 893 CDD eukary_NR_Moco 74 459 - -
Dere04g0981 893 CDD cyt_b5_reduct_like 641 893 - -
Dere04g0981 893 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 515 594 IPR036400 -
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 332 344 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 363 377 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 429 441 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 281 294 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 248 264 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 175 187 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 190 205 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 111 127 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 265 278 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 164 175 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 404 414 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 89 103 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 377 389 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Eukaryotic molybdopterin domain signature 442 455 IPR008335 GO:0016491
Dere04g0981 893 PRINTS Cytochrome B5 reductase signature 688 695 - -
Dere04g0981 893 PRINTS Cytochrome B5 reductase signature 766 785 - -
Dere04g0981 893 PRINTS Cytochrome B5 reductase signature 733 747 - -
Dere04g0981 893 PRINTS Cytochrome B5 reductase signature 861 869 - -
Dere04g0981 893 PRINTS Cytochrome B5 reductase signature 667 678 - -
Dere04g0981 893 PRINTS Cytochrome B5 reductase signature 804 815 - -
Dere04g0981 893 FunFam Nitrate reductase [NADH] 743 893 - -
Dere04g0981 893 Pfam Oxidoreductase FAD-binding domain 641 747 IPR008333 -
Dere04g0981 893 PRINTS Cytochrome B5 signature 566 573 IPR001199 -
Dere04g0981 893 PRINTS Cytochrome B5 signature 541 551 IPR001199 -
Dere04g0981 893 PRINTS Cytochrome B5 signature 578 590 IPR001199 -
Dere04g0981 893 PRINTS Cytochrome B5 signature 551 565 IPR001199 -
Dere04g0981 893 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 516 591 IPR001199 -
Dere04g0981 893 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 804 815 IPR001709 GO:0016491
Dere04g0981 893 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 792 801 IPR001709 GO:0016491
Dere04g0981 893 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 550 560 IPR001709 GO:0016491
Dere04g0981 893 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 837 853 IPR001709 GO:0016491
Dere04g0981 893 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 766 785 IPR001709 GO:0016491
Dere04g0981 893 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 688 695 IPR001709 GO:0016491
Dere04g0981 893 Pfam Cytochrome b5-like Heme/Steroid binding domain 521 590 IPR001199 -
Dere04g0981 893 MobiDBLite consensus disorder prediction 593 621 - -
Dere04g0981 893 PIRSF Nitr_rd_NADH 6 892 IPR012137 GO:0006809|GO:0042128|GO:0050464
Dere04g0981 893 SMART Cyt_b5_2 519 591 IPR001199 -
Dere04g0981 893 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 71 332 IPR036374 -
Dere04g0981 893 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 140 175 IPR022407 GO:0043546
Dere04g0981 893 Gene3D - 72 325 IPR036374 -
Dere04g0981 893 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 547 554 IPR018506 GO:0020037
Dere04g0981 893 SUPERFAMILY E set domains 334 460 IPR014756 -
Dere04g0981 893 FunFam Nitrate reductase 75 325 - -
Dere04g0981 893 Pfam Oxidoreductase NAD-binding domain 767 874 IPR001433 GO:0016491
Dere04g0981 893 Gene3D - 743 893 IPR039261 -
Dere04g0981 893 SUPERFAMILY Riboflavin synthase domain-like 631 748 IPR017938 -
Dere04g0981 893 Gene3D - 334 510 - -
Dere04g0981 893 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 735 888 IPR039261 -
Dere04g0981 893 Pfam Oxidoreductase molybdopterin binding domain 123 302 IPR000572 -
Dere04g0981 893 FunFam NADH-cytochrome b5 reductase 627 742 - -
Dere04g0981 893 FunFam Nitrate reductase 334 510 - -
Dere04g0981 893 Gene3D - 512 592 IPR036400 -
Dere04g0981 893 FunFam Sulfite oxidase, mitochondrial 514 594 - -
Dere04g0981 893 PANTHER SULFITE REDUCTASE 74 464 - -
Dere04g0981 893 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 636 748 IPR017927 GO:0016491
Dere04g0981 893 Pfam Mo-co oxidoreductase dimerisation domain 330 461 IPR005066 GO:0016491|GO:0030151
Dere04g0981 893 Gene3D Translation factors 629 742 - -
Dere04g0981 893 MobiDBLite consensus disorder prediction 593 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0981 Dere-ChrDere04 10406583 10410923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0981 629 884 NADPH P450 reductases AT5G17770 41.473 1.00e-52 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0981 04 10406583 10410923 Dere04g0981 04 10406583 10410923 ECH