Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0978 ATGCTGAAAAGCCCTCATAGTTTTAGATGGATTTATTTCTCTATGCATCATCTACCTCTTTTTCTCGGTCAAAGCAAGCAAACTAAGGGCATGGATCAGAAGAAGATTCGAAGAAAACCGAAGCTCGAGCGCCGCAATGCTGCCAAATACTATGAGTATGATGCTGGGTCGACTTCATCGTCGCTGGACGACTACTCTGGATCTCTCTATACTCGATCAATGGAGTTCTATGACCGAACTAGCTTCCGAATTGAGGGAGTTGAAGGTGAGTTTGATCTAATATGCAGGAGTTTGGGGCTGTCGGGACCAGAAGACTTCGCTATCCCGGCCTCAGCGTGGGAAGCTTTGAAGGTTAGGTCGTCTTCGGATATTCTGCCCAGGTTGAAGCTGAACGAGTTGGAAAGTCAGGAGAAGGAAGGGGTGAAAGATAAAGAGGTGACTCAGATAGTGAGTGAATCGGGCGACAATTGTGAAGAAAGGGTTATTAGAGATGTGGCTGAGTCAGCTGCAGACGAGCCTGCCGAGACAAGTGGGTGCTGCATTGCTGGTGATGGTCTATGTGGAGTCGGCGTCGGAGGAGGTATCAAGGGTCTCCGTCCGCCGATGATTAAGCCACCGCCAGGGATGAGGCGTCCGGTTGTTGATAACATGTGTTCTACTTGGGATATTTTGAGGGATTTTGCTCCGCCAGGAGAAAGGCAGTCATCGGAAAACCACGGGGAGCAGAACTCTTCCAACGATGACCAAAAAATACGGAGAGAAACGGAGAGAGCAGAAGAACAGAAACAAGAAGAAGCAGGAGTACGGGAGGTGGATGGGGTCACTCCGAAAGGAGAACAGGAGGACAATGCAACAAGGCTTGCGGAGATTGTTGCTGAGCTGTCGGGATCGTGTTCGTTTACTACGTCAAACGAAGACGATTCTTCTAGCACTACCACGGATCCTAGGTCGACTAATATATCTCCTAACGGAAAATTTAGACGAATTATTGCGAACTGGCAAAAGGGTGAGCTTTTGGGACGTGGCTCGTTTGGGTCAGTCTATGAAGGAATTTCTGAAGATGGATTCTTCTTTGCTGTAAAAGAAGTTTCACTGCTTGATCCAGGGAGTCAGGGAAAGCAAAGTGTCTATCAACTGGAGCAAGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATTGTTCAATACTATGGCACAGAAATGGATGAATCAAAGCTGTACATCTTTCTTGAGCTTGTTACTAAAGGTTCCCTTGCAAGCCTCTACCGGAGGTATAACCTTCGAGATTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTACCTGCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAACTTGCAGATTTTGGATTAGCAAAGGCCACCAAATTAAATGATGTCAAATCATGCAAGGGGACAGCATTTTGGATGGCCCCTGAGGTTGTGAGGAATAAAGGATATGGGCTTCCAGCTGATATATGGAGTCTTGGTTGCACTGTGTTGGAGATGTTAACGGGCCAAATTCCATACTCTCATCTGGAATGTATGCAGGCATTGTTTAGAATTGGAAAAGGTGAGCGCCCTCCTGTTGCTGATTCTCTTTCCAAAGATGCAAGGGATTTTATACTGCAGTGTCTTCAAGTCAATCCAGATGCTCGTCCCACGGCTGCTCAGCTCTTAAGCCATGCATTTGTCCAAAGGCCACTTTCCATGTCTTCTGGCTCTGGATCTGCATCCCCTGGCATTCCTGGCAGAAGGGCTTAA 1821 0.4657 MLKSPHSFRWIYFSMHHLPLFLGQSKQTKGMDQKKIRRKPKLERRNAAKYYEYDAGSTSSSLDDYSGSLYTRSMEFYDRTSFRIEGVEGEFDLICRSLGLSGPEDFAIPASAWEALKVRSSSDILPRLKLNELESQEKEGVKDKEVTQIVSESGDNCEERVIRDVAESAADEPAETSGCCIAGDGLCGVGVGGGIKGLRPPMIKPPPGMRRPVVDNMCSTWDILRDFAPPGERQSSENHGEQNSSNDDQKIRRETERAEEQKQEEAGVREVDGVTPKGEQEDNATRLAEIVAELSGSCSFTTSNEDDSSSTTTDPRSTNISPNGKFRRIIANWQKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDPGSQGKQSVYQLEQEIALLSQFEHENIVQYYGTEMDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVRNKGYGLPADIWSLGCTVLEMLTGQIPYSHLECMQALFRIGKGERPPVADSLSKDARDFILQCLQVNPDARPTAAQLLSHAFVQRPLSMSSGSGSASPGIPGRRA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0978 606 SUPERFAMILY Protein kinase-like (PK-like) 309 587 IPR011009 -
Dere04g0978 606 MobiDBLite consensus disorder prediction 298 323 - -
Dere04g0978 606 FunFam Mitogen-activated protein kinase 1, putative, expressed 331 597 - -
Dere04g0978 606 ProSiteProfiles Protein kinase domain profile. 333 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0978 606 Pfam Protein kinase domain 334 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0978 606 Gene3D Transferase(Phosphotransferase) domain 1 331 597 - -
Dere04g0978 606 MobiDBLite consensus disorder prediction 226 283 - -
Dere04g0978 606 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Dere04g0978 606 SMART serkin_6 333 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0978 606 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 211 601 - -
Dere04g0978 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Dere04g0978 606 MobiDBLite consensus disorder prediction 243 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0978 Dere-ChrDere04 10386302 10392062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0978 34 588 MAP Kinase Kinase Kinase AT4G08500 51.753 1.12e-177 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere04g0978 Pkinase 5.3e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0978 04 10386302 10392062 Dere04g0978 04 10386302 10392062 ECH