Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0975 ATGACCGGGGGCCGATGTCACCGGAGGAAGAAAATGATGGGTAGGGGTGCGGAAGGAGGTTGCGGAACCGAGGAGAGGCCTTGTCCAGTTTCTAGGGTTCCGGTTAAATTCCCGGCGACCCAGCCGGGAAATTCTGATGACTCCATTGTACGTGAAATTGATTACTACTCCCAGGCTAGAAAAGCGCTCAGTGAGCGCTCGCCTTTTGATGTTGCGGAAGAGACGTCGACATCGACTGTGCCCACTCTGCCTATTGGGTTGTCAAGCTTCTTAAACCGCTATTCTGAAAGTCGGAGACGCCACAAGAAGTCTCATTCGGGCGCGGACAAGAAATCATCTAGAGCATGCGAGAAGTCACGGAGTTCAAGCATTTGGGTTGAGACTGAAGAGTACTTTAGGGAGTTAAAATTGCCTGATATAGACACCTTGTTGGAGGCATCATCCTCTTTTAGTTTAGCTGCTCGTAAGTGTTATTCTATTCCACTAGTGGGAAATGCTCCGAGGTTAAATGTAGCTAGTAACGAGAATGACAAGGTTATTGATGGAAACCAAAATAGCGAGGTTGTGAAAAATGAGGGCGGTGTCACGGAAATTGACAGTTTTTCTGCTGAAGTTTTGCCTCAGGATTATAAGGATCATGCTACTTCTGATTCGACCACTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGACTTCTCTTACTTCTGAGCGCCCTTCAAAGAAAAGGAAGGTTTTGGGTGGTGATGCTGGGTTGGAGAAATTTTTAGTTGCTATTCCTTGTGACGGAGACTCTTCTTTGTGCCATTATTGCTGCAGAGGGGACACCAGTAGAGAGTCCAATCAATTAATTGTCTGTGATATTTGTAAAGTTACAGTTCATAAGAAGTGCTATGGTGTGCAAGATGATGTAGGCGAGTCTTGGTTGTGCTCCTGGTGCAAGCAAAAGGATGATATTGGCGAAATGGTGAACCCTTGTACGCTTTGCCCAAAGAAGGGTGGTGCTTTAAAACCTCTTCATAGAAGCGCAGAAAGTGTTGGGTCTATCCAATTTGCTCACTTGTTTTGTTGTTTGTGGATGCCTGAGGTTTATATAGAGGATTTGAAGAAAATGGAGCCTGTTATGAATGTTGGAGGACTCAAGGAAACCCGGAGAAAATTAGTCTGTAATATTTGCAAGGTGAAGTTTGGCGGATGTATTCGTTGTAGCCATGGAGCCTGCAGGACTTATTTCCATCCTTTGTGTGCAAGGGAGGCTAGACAGAGGATGGAGGTTTGGGCAAAAAATGGTTATGACAATGTTGAGTTGCGGGCCTTTTGCTCCAAGCACTCAGATCTACAAGGGAGCAGCAGCTTCTTGACATCAGGTTGCTCTGTAGCTTTTGGTCGTGAGTGTTCTTTTCCTGACATACTTCCGGTGACAGTGCCAGCAGGCAGACAAGACAATTTGAAAATTGGTTGCAGAAATGTAGACAATATTGGGATAGTTTCTGATGGTAGTCCTGATAATTTGAGCCATAGTGAACAGCTGGTTGAAGGATTGTCTGATTGTCGGTTAAATTTTTGTGACACATCAAAATGTGGTGGTTTGCCACAACTAAAAAGTACTGCAGTGGTGGGGAGGACTGATGACATTGTTAATGCATCTGACCATCTTGGTTTTGCACTTGTTTTGAAGAAGTTGATAGATCGAGGAAAAGTTGACGCTAAAGATGTAGCTTTGGAGATTGGCATTTCTCCAGATGCATTAAGTGCAAATATCAATGAGTCTTGCATGGCCCCTGACGTGCAATGCAAAATAATCAATTGGTTAAAAGATCATGTATATACTAATGCATTCCAGAAAAGTTTGAAAGTCAAATTCAAGCCAGCCAATTCATCAAAGGATGAAAATGGAGTCACTGATGGTTCTGATACTTTACCTGTATCAGATTCAGAGTTGCCAGATCCTGTTGCTGTTAAGTCAGTACCACCAAGGAGAAGAACCATCAGTAACATCAGGATTTTGAAGGATAACAAAGTGTTATGTTCGTCTGAGGTGGTCTCTAGTGAGAATGGGATGCCAATGGACAAGGTCAAAGTGGGTCAATCTGACCATGAAAATTCTGAAACATTAAATGAAGCCTCCATTTCTGATGCAACTGAAATGCAATTAACCAAATCTGAGGATTCTTTTACTGATTCTCAAGGGAATGCAGATAAACCTTGCAAAAGCAGCTTATCTGAATGTGTATCAGAGAAAAGGAAGATTGAAGCAAACTCTGGTTACATTCACCCATACATCAGTAAAAAATTATTGCAGATTCATGATGGTGTGCTTTCAGACGATGTTATATGTCCAGGGGAGGAAGGAAATCTTCATTTGGGTGAATTCTCAAAGGCTAGTGGTTATTCTAGTAACCAAAATCAGGAATTAAGTTGCAGTGAAATTTGTAAGGCTGATAAAGTAAATATGGAGCAATTGATTATGGCTAGAAATATGGGTTTATTAGAATCTTGTCCAGAAGATGAAGTGGAGGGTGAACTTATATATTTTCAGCATAGATTATTGCAGAATTCAGTTGCAAGGAAGAAGTTTGCTGATAAGTTAATCTATAGTATAGCTAAGAGTCTTCCACGGGAGATTGATGCAGCACATCAGCAAAGATGGGATGCTGTGCTTGTTAACCAGTATCTGTGTGATCTTAGGGAGGCAAAAAAGCAGGGCAGAAAGGAGAGAAGGCACAAGGAAGCACAGGCAGTGCTAGCTGCTGCAACTGCTGCTGCTGCAGCATCTTCTAGGGTGTCTTCGTTTCGAAAGGATGCCTTAGATGAATCTGTGCAGCCGGAGAATTTGCTAAAGCACACTTTCAGTGGGAGGACTGGTGTTAGCTCTCAGCCAATGCCACGGGCCAAAGAGACACTTTCAAGAGTAGCTATGACAAGGACTTCATCAGAAAAATATTCAGACTTTGGTCTGCCAACCACAGATTTTTCTAAGGAGCATCCTAGTTCATGTGATATCTGCAGACGATCTGAGACTATATTGAACCCTATTCTTGTCTGCTCTGGATGCAAGGTTGCTGTTCACTTGGATTGCTATCGTAGTGTAAAGGAATTTACAGGTCCATGGTACTGTGAATTATGCGAAGATATATCATCTCGAATAGCTGGGGCACCTACTATCAATTTTTGGGAGAAGCCTTATTGTGTAGTGGAATGTGGAATATGCGGTGGTACTACTGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTTCATGCGTTTTGTGCTGAGTGGGTTTTTGAGACAACATTCAGAAGAGGACAAGTAAATGCTATTGAAGGAATGGATACTGTGTCGAAAGGAGTTGATATTTGTTGCGTCTGCCACCGCAAGCATGGTGTATGCTTAAAGTGTAGCTATGGCCATTGTCAGACCACATTCCATCCATCCTGTGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGACTGCCAGTGGCAAGCTGCAGCATAGGGCTTACTGTGAAAAGCACGGTTTGGAGCAGAGGGCAAAGGCTGAAAGTCAAAAACATGGAATTGAAGAGTTAAAAAGCATCAAGCAAATTAGGGTTGAACTAGAGAGATTGCGTCTCCTCTGCGAAAGAATTGTCAAACGTGAAAAAATAAAGCGAGAATTGGTTCTATGCTCACAAGACATACTTGCCTTCAAAAGAGATCATGTAGCTAGGTCTGTCTTGGTTCATAGCCCTTTCTTCCTTCCTGATTGTAGTTCAGAATCAGCTACAACTTCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGCGAAGCAGTCCAAAGGTCAGATGATGTAACTGTGGACAGCTCAGTTTCTGCTAAGCATCGAGTAAGAGTTGCTGTAACCATGGACAATGACCCGAAGTTGGATGATGACTGTTCCACTTCACAAAGCCATTATAATCATAAGATTCCTGAGCGGGGGCAATTTTCTGGCAAGCAGATTCCTCATAGAGCTTCTATCTCACGCAATCTTTTGGATGACTGTGGATGGAGATCGAAATCAAGAAAGCATTCAGAGACATTTGGAAAAGAGCTGGTTATGACGTCAGATGAAGCATCTATGAAGAATTCAATGTTACCTAAGGGATATGCATATGTTCCTGCTGATTGTTTGTCTAATGATAAGCAATCTAACCAGGACGTATTTGCTAGTAGTGAACCAGTGGAGCACGATGGGTAA 4224 0.4276 MTGGRCHRRKKMMGRGAEGGCGTEERPCPVSRVPVKFPATQPGNSDDSIVREIDYYSQARKALSERSPFDVAEETSTSTVPTLPIGLSSFLNRYSESRRRHKKSHSGADKKSSRACEKSRSSSIWVETEEYFRELKLPDIDTLLEASSSFSLAARKCYSIPLVGNAPRLNVASNENDKVIDGNQNSEVVKNEGGVTEIDSFSAEVLPQDYKDHATSDSTTSLEWLLGCRNKTSLTSERPSKKRKVLGGDAGLEKFLVAIPCDGDSSLCHYCCRGDTSRESNQLIVCDICKVTVHKKCYGVQDDVGESWLCSWCKQKDDIGEMVNPCTLCPKKGGALKPLHRSAESVGSIQFAHLFCCLWMPEVYIEDLKKMEPVMNVGGLKETRRKLVCNICKVKFGGCIRCSHGACRTYFHPLCAREARQRMEVWAKNGYDNVELRAFCSKHSDLQGSSSFLTSGCSVAFGRECSFPDILPVTVPAGRQDNLKIGCRNVDNIGIVSDGSPDNLSHSEQLVEGLSDCRLNFCDTSKCGGLPQLKSTAVVGRTDDIVNASDHLGFALVLKKLIDRGKVDAKDVALEIGISPDALSANINESCMAPDVQCKIINWLKDHVYTNAFQKSLKVKFKPANSSKDENGVTDGSDTLPVSDSELPDPVAVKSVPPRRRTISNIRILKDNKVLCSSEVVSSENGMPMDKVKVGQSDHENSETLNEASISDATEMQLTKSEDSFTDSQGNADKPCKSSLSECVSEKRKIEANSGYIHPYISKKLLQIHDGVLSDDVICPGEEGNLHLGEFSKASGYSSNQNQELSCSEICKADKVNMEQLIMARNMGLLESCPEDEVEGELIYFQHRLLQNSVARKKFADKLIYSIAKSLPREIDAAHQQRWDAVLVNQYLCDLREAKKQGRKERRHKEAQAVLAAATAAAAASSRVSSFRKDALDESVQPENLLKHTFSGRTGVSSQPMPRAKETLSRVAMTRTSSEKYSDFGLPTTDFSKEHPSSCDICRRSETILNPILVCSGCKVAVHLDCYRSVKEFTGPWYCELCEDISSRIAGAPTINFWEKPYCVVECGICGGTTGAYRKSSDGHWVHAFCAEWVFETTFRRGQVNAIEGMDTVSKGVDICCVCHRKHGVCLKCSYGHCQTTFHPSCARSAGFYMNVRTASGKLQHRAYCEKHGLEQRAKAESQKHGIEELKSIKQIRVELERLRLLCERIVKREKIKRELVLCSQDILAFKRDHVARSVLVHSPFFLPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKHRVRVAVTMDNDPKLDDDCSTSQSHYNHKIPERGQFSGKQIPHRASISRNLLDDCGWRSKSRKHSETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKQSNQDVFASSEPVEHDG 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0975 1407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 976 1049 IPR013083 -
Dere04g0975 1407 MobiDBLite consensus disorder prediction 1 47 - -
Dere04g0975 1407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 319 IPR013083 -
Dere04g0975 1407 SUPERFAMILY FYVE/PHD zinc finger 259 315 IPR011011 -
Dere04g0975 1407 MobiDBLite consensus disorder prediction 94 115 - -
Dere04g0975 1407 ProSiteProfiles Extended PHD (ePHD) domain profile. 323 444 IPR034732 -
Dere04g0975 1407 SMART PHD_3 267 314 IPR001965 -
Dere04g0975 1407 SMART PHD_3 388 444 IPR001965 -
Dere04g0975 1407 SMART PHD_3 1119 1173 IPR001965 -
Dere04g0975 1407 SMART PHD_3 998 1043 IPR001965 -
Dere04g0975 1407 MobiDBLite consensus disorder prediction 688 713 - -
Dere04g0975 1407 SUPERFAMILY FYVE/PHD zinc finger 991 1044 IPR011011 -
Dere04g0975 1407 ProSitePatterns Zinc finger PHD-type signature. 268 313 IPR019786 -
Dere04g0975 1407 MobiDBLite consensus disorder prediction 627 641 - -
Dere04g0975 1407 Coils Coil 1193 1213 - -
Dere04g0975 1407 ProSiteProfiles Extended PHD (ePHD) domain profile. 1064 1173 IPR034732 -
Dere04g0975 1407 Pfam PHD-zinc-finger like domain 325 443 - -
Dere04g0975 1407 Pfam PHD-zinc-finger like domain 1066 1172 - -
Dere04g0975 1407 Pfam PHD-finger 281 314 - -
Dere04g0975 1407 Pfam PHD-finger 1010 1043 - -
Dere04g0975 1407 MobiDBLite consensus disorder prediction 1302 1328 - -
Dere04g0975 1407 ProSiteProfiles Zinc finger PHD-type profile. 265 316 IPR019787 -
Dere04g0975 1407 MobiDBLite consensus disorder prediction 624 654 - -
Dere04g0975 1407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 320 446 IPR013083 -
Dere04g0975 1407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1063 1174 IPR013083 -
Dere04g0975 1407 CDD ePHD 1067 1172 - -
Dere04g0975 1407 ProSitePatterns Zinc finger PHD-type signature. 999 1042 IPR019786 -
Dere04g0975 1407 ProSiteProfiles Zinc finger PHD-type profile. 996 1045 IPR019787 -
Dere04g0975 1407 PANTHER PHD FINGER PROTEINS 87 936 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0975 262 446 C2H2 Transcription Factor Family AT3G14740 31.383 8.92e-16 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0975 04 10330988 10343251 Dere04g0975 04 10330988 10343251 ECH