Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0974 ATGGGCTCGCTGGAGACACCGAAGAGTGCGGATAACGGTTCTGCACCAGTTGCCGGCAACGGGAAAGCTCCCGCTGCCGACGGGGCAACCTCGCAGCCAACGGAGCCTGCCGAAATGGCGTCGGAAAATCCAATGGAATCCGACCAGTCAAAGAAGCGGAGAATGGCTATGCTTCCCCTGGAGGTTGGTACTAGGGTCTTGTGCCGTTGGAGGGACGGAAAATTTCACCCTGTGAAAGTCATTGAACGCCGCAAGATGCAAACTGGAGGCCCTAATGATTATGAGTATTACGTCCATTACACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGAACAGCTTGATCTTGATTCAGTGGAGGCTGTTGTTGATGAGAAAGTGGAGGATAAGGTGACAAGCTTGAAAATGACACGCCACCAAAAGAGGAAGATCGATGAGACACATGTAGAGGAGGGCCATGAGGAACTTGATGCTGCTAGCTTGCGAGAGCATGAGGAATTTACAAAAGTGAAAAATATAGCCACTATTGAACTTGGAAGATATGAGATTGAGACTTGGTACTTCTCCCCCTTCCCACCAGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAATTTTGCCTGAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAGTGTGACCTTAAGCATCCCCCTGGCGATGAGATATACAGAAGTGGTACACTGTCTATGTTTGAGGTTGATGGCAAAAAGAACAAAATTTATGGGCAGAATCTTTGTTATCTGGCAAAGTTGTTTCTGGATCACAAGACCCTCTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGAACGAGGATGCCATATGGTTGGCTATTTTTCCAAGGAAAAACATTCAGAGGAATCTTATAATTTGGCATGCATCCTCACCCTTCCACCCTACCAAAGGAAAGGCTACGGCAAATTTCTAATAGCTTTCTCATATGAACTTTCTAAGAAGGAGGGCAAAGTTGGCACACCTGAAAGACCCCTTTCTGACCTTGGGTTGCTGAGCTACAGAGGATACTGGACCAGGGTTCTTTTAGACATCTTGAAGAAGCATAAGGGTAATATATCTATTAAGGAGCTGAGTGACATGACAGCCATTAAAGCTGAAGATATATTGGCCACCCTTCAGAGCCTTGAATTGATTCAATACAGGAAAGGCCAGCATGTCATATGTGCAGATCCAAAAGTTCTAGAGCGCCATCTCAAAGCAGCTGGAAGAGGTGGTCTGGATGTTGATGTTAGCAAATTAATCTGGACTCCCTATAAAGAACAAGGGTGA 1341 0.4519 MGSLETPKSADNGSAPVAGNGKAPAADGATSQPTEPAEMASENPMESDQSKKRRMAMLPLEVGTRVLCRWRDGKFHPVKVIERRKMQTGGPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKIYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDERGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILATLQSLELIQYRKGQHVICADPKVLERHLKAAGRGGLDVDVSKLIWTPYKEQG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0974 446 Pfam RNA binding activity-knot of a chromodomain 60 118 IPR025995 -
Dere04g0974 446 MobiDBLite consensus disorder prediction 1 52 - -
Dere04g0974 446 FunFam Histone acetyltransferase 229 357 - -
Dere04g0974 446 Pfam MOZ/SAS family 231 408 IPR002717 GO:0004402|GO:0006355|GO:0016573
Dere04g0974 446 CDD NAT_SF 281 340 - -
Dere04g0974 446 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 171 442 IPR016181 -
Dere04g0974 446 FunFam Histone acetyltransferase 50 170 - -
Dere04g0974 446 PANTHER HISTONE ACETYLTRANSFERASE 55 442 - -
Dere04g0974 446 Gene3D - 31 170 - -
Dere04g0974 446 Gene3D - 349 429 IPR036388 -
Dere04g0974 446 Gene3D - 171 227 - -
Dere04g0974 446 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 170 441 IPR002717 GO:0004402|GO:0006355|GO:0016573
Dere04g0974 446 SMART chromo_7 74 133 IPR000953 -
Dere04g0974 446 Gene3D - 229 441 - -
Dere04g0974 446 CDD CBD_MOF_like 63 132 - -
Dere04g0974 446 SUPERFAMILY Chromo domain-like 52 171 IPR016197 -
Dere04g0974 446 FunFam Histone acetyltransferase 349 428 - -
Dere04g0974 446 FunFam Histone acetyltransferase 169 226 - -
Dere04g0974 446 Pfam MYST family zinc finger domain 172 226 IPR040706 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0974 Dere-ChrDere04 10324372 10329423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0974 1 446 C2H2 Transcription Factor Family AT5G64610 85.938 0.0 794