Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0960 ATGAGTAATCTGAGAACGTTGTGCAGGCCTCAACCACTGTTCTCCTTCATTAGTTGCAGACAACAATTTCGATCGAGGGCTTCATTTGGAAGCCCTAATTGTAAGTCTCGTTTGCCATCGCCGTCCTTATATTCTAAATGGTTAGATTCTCAGGGTTCGAGCAGAATTGAGCTTGGGTTTCGCGGCAATCAGAGGAGAACTGTGGTCAGGGCGTCGAACTGGACTGAGCAAAAATCCCCATATGAAACTCTTGAATTAGAAAGAGATGCGGATGAGGAGCAGATAAAGAATGCCTATAGACGATTGGCCAAATTTTATCACCCAGACGTCTATGATGGTAGAGGAACCCTTGAAGAAGGTGAAACAGCAGAAGCAAGGTTCATCAAGATTCAAGCTGCTTATGAATTACTTATAGATCACAAGAGGCGGCGGCAGTATGATATGGATAACCGAGTGAACCCAATGAAGGCATCTGAAGCATGGATGGAGTGGCTTATGAAAAAGCGAAAGGCTTTTTATCAGCGAGGTGATATGGCAATTGCTGCTTGGGCAGAGCAGCAACAGCGTGAGTTAAATATTCGTGCACGTAGTCTATCTCGTTCAAAGATTGATCCAGAAGAAGAAAGGAAGATCCTGGCAAGAGAAAAGAAAGCTTATGCTGAAAATTTCTCCAATACCCTTAAGAGGCATACACTCGTATTGAAGAAAAGAGATTTAATGCGAAGAAAGGCTGAGGAAGAAAAAAAGAAGACTATCAGTCGGCTGTTAGCTGCAGAGGGTCTTGAGCTTGATCCAGATAGTGATGAGGCACTGTAG 816 0.4375 MSNLRTLCRPQPLFSFISCRQQFRSRASFGSPNCKSRLPSPSLYSKWLDSQGSSRIELGFRGNQRRTVVRASNWTEQKSPYETLELERDADEEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDHKRRRQYDMDNRVNPMKASEAWMEWLMKKRKAFYQRGDMAIAAWAEQQQRELNIRARSLSRSKIDPEEERKILAREKKAYAENFSNTLKRHTLVLKKRDLMRRKAEEEKKKTISRLLAAEGLELDPDSDEAL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0960 271 Coils Coil 81 101 - -
Dere04g0960 271 SMART dnaj_3 78 142 IPR001623 -
Dere04g0960 271 CDD DnaJ 80 139 IPR001623 -
Dere04g0960 271 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Dere04g0960 271 SUPERFAMILY Chaperone J-domain 72 148 IPR036869 -
Dere04g0960 271 Gene3D DnaJ domain 66 179 IPR036869 -
Dere04g0960 271 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Dere04g0960 271 Pfam DnaJ domain 80 147 IPR001623 -
Dere04g0960 271 PRINTS DnaJ domain signature 122 142 IPR001623 -
Dere04g0960 271 PRINTS DnaJ domain signature 81 99 IPR001623 -
Dere04g0960 271 PRINTS DnaJ domain signature 99 114 IPR001623 -
Dere04g0960 271 PANTHER CO-CHAPERONE PROTEIN DJLA 56 267 - -
Dere04g0960 271 FunFam Chaperone protein dnaJ 65 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0960 Dere-ChrDere04 10205210 10208769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0960 71 147 C2H2 Transcription Factor Family AT1G74250 37.662 2.31e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0960 04 10205210 10208769 Dere04g0960 04 10205210 10208769 ECH