Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0959 ATGGATGTACACATCAGCTCACCGAAAAAGAAAAAGGGGATAGCTTTTGGTGCTGAGAGGAAATGGTTAAAAGTTGTGGAGGATGACCTAATTTTGCGGTCTCCATCTATAAATCTGAAGACAGATCTTTCCACTTGTAAGATGCTGGAAACAGGCTCGTTCTGTACTAAAATACGGTGTGCACAGCATGAACTTTGTCAGATGCAGACAGCAAAAAATAAAAGATTGAAAAGGTTCTATCAAGCTAAGCTTGGTTTTCTTCGCCTTGTACTGGGTTTGGCTTCTATTTTGGTTTACTCAATTGGGGAAAAGTCGTCCCTTTCGGCAAAACAAAACACACAGATAATCAAAGTTCGTTTTTCACATCTGAAGTATCTTTTCATATGTCATGGGCTCGATTTGCCCACCAGAGGAAGCTTTCAATCGTGTGGAAAATATATAACTATGAGCTCTCCATCAACTCAACTTGTCATCTCAAAAAGGATGGGCATATATGAGCCATTCCAACAAGTTAGCATGTGGGGGGACAACTTTAAAGTTGATAACAGCCTAAATTCAGGTGCTTCCCCAATATTCATGGTGAACCCTAGCACAGAGAACAAGTCTGAATATATTCCACATGAACCAAGTGGACCCTCGGGAGATGATCAAGAGACCAATAAAGCAGTTAGTAAGGGGCTAAGACGCTTGGCTCAAAATCGTGAAGCTGCTCGAAAAAGTCGTCTGCGGAAAAAGGCTTATGTCCAACAATTAGAAACAAGCCGTATGAAGCTCATGCAATTGGAGCTAGAGATTGAGAAAGCAAGAAAGCAGGGTCTGTGTATGGGCGGGGTATTAGATGCTAATTATATAGGATCATTTGGAACGGTAAACCCAGGGATTGCAGCTTTTGAGGTCGAATATGGGCATTGGGTTGAAGAACAGCATAGACAGAATGTAGAACTTAGAAACGCATTGCAAACTCATTCATCTGATGTGCAGCTGCATCTACTTGTTGAGAGTTGCTTGAACCATTACTCAAATCTTTTCAGGATGAAGGCTGATGCTGCAAAGGCTGATGTCTTTTATTTAATCTCTGGAGTATGGAAAGCATCAGTAGAACGTCTTTTTCTTTGGATTGGAGGATCTCGCCCATCACAGCTTCTTAGTATCATCGTGCCACAGCTCGAGCCTTTGACAGATCAACAGATAGCGAGTTTCAACAAACTTCGGCAATCTTCTCAGCAAGCCGAAGATGCTCTTTCACAAGGATTGGATAAACTCCAGCAGAGTCTGGTCCTCAACATAGCAGCTGATCCATTAGACGTGGAAAACTTTGGGTTTCAGATGACTTCTGCCATGGAGAAAATTGAAGCGCTAGAGGGTTTTGTAAATCAGGCAGATCACCTTCGGCAACAAACCTTACAGCATATGTCTCGGATCCTGACAACCCAGCAAGCAGCTCAAGGCATGCTGGCCCTAGGGGAATACTTTCACCGTCTTCGTGCTCTAAGTTCTCTGTGGGCTGCTCGTCCAAGTGATCCTACATTCCAAACTTAG 1539 0.4308 MDVHISSPKKKKGIAFGAERKWLKVVEDDLILRSPSINLKTDLSTCKMLETGSFCTKIRCAQHELCQMQTAKNKRLKRFYQAKLGFLRLVLGLASILVYSIGEKSSLSAKQNTQIIKVRFSHLKYLFICHGLDLPTRGSFQSCGKYITMSSPSTQLVISKRMGIYEPFQQVSMWGDNFKVDNSLNSGASPIFMVNPSTENKSEYIPHEPSGPSGDDQETNKAVSKGLRRLAQNREAARKSRLRKKAYVQQLETSRMKLMQLELEIEKARKQGLCMGGVLDANYIGSFGTVNPGIAAFEVEYGHWVEEQHRQNVELRNALQTHSSDVQLHLLVESCLNHYSNLFRMKADAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLSIIVPQLEPLTDQQIASFNKLRQSSQQAEDALSQGLDKLQQSLVLNIAADPLDVENFGFQMTSAMEKIEALEGFVNQADHLRQQTLQHMSRILTTQQAAQGMLALGEYFHRLRALSSLWAARPSDPTFQT 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0959 512 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 228 243 IPR004827 GO:0003700|GO:0006355
Dere04g0959 512 SMART brlzneu 221 281 IPR004827 GO:0003700|GO:0006355
Dere04g0959 512 MobiDBLite consensus disorder prediction 199 221 - -
Dere04g0959 512 FunFam BZIP family transcription factor 224 273 - -
Dere04g0959 512 SUPERFAMILY Leucine zipper domain 226 259 IPR046347 GO:0003700|GO:0006355
Dere04g0959 512 Pfam bZIP transcription factor 225 257 IPR004827 GO:0003700|GO:0006355
Dere04g0959 512 Coils Coil 244 271 - -
Dere04g0959 512 ProSiteProfiles DOG1 domain profile. 294 504 IPR025422 GO:0006351|GO:0043565
Dere04g0959 512 PANTHER TRANSCRIPTION FACTOR TGA9 149 506 - -
Dere04g0959 512 Gene3D - 224 273 - -
Dere04g0959 512 Pfam Seed dormancy control 314 386 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0959 Dere-ChrDere04 10197450 10204291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0959 150 509 Calmodulin-binding Proteins AT1G77920 58.133 2.12e-147 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere04g0959 DOG1 6.5e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0959 04 10197450 10204291 Dere04g0959 04 10197450 10204291 ECH