Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0950 ATGTCGTCGACGAATTCTCCGTGCGCGGCGTGCAGGATTCAGAGAAGGAAATGCACACAGGATTGCGTGTTCGCGCCGTATTTCCCGGCGGACAACCCTCAGAGGTTTGCTTATGTCCACAAGGTATTTGGGGCGAGTAATGTGGCTAAGATTCTGAACGAGCTTGGCGCGGCGCAGCGCGAGGACGCCGTCAAATCCTTGGCTTACGAGGCGGAGGCCCGCCTCCGGGACCCCGTCTACGGCTGCGTGGGTCTCATCTCCGTCCTCCAACACAGGCTGAAGCAGCTCCAGATTGAACTCCTCGACGCCAGAAAAGAACTCGCCTCCTATATTGGACCTCAGGCCTTGCTTCCCGTTTCGCAATCTCCTGCTGGTGCTCTCAATGTGAATGTGGATGGGATCTCAACACACCACCACAACCACATGATCGGAATCAACCCAACTCATCAATACCAGATGATGCAGCAGCATGAGCTCTTGACGATGAATGGTGGCGGTTTCGAAGGGGCTTCGGCTGATGGGTTCAACCAGATTTCTGCTGCTAATACGATGCCGCCTTCACTGGCATTAGGCCCCGCCGATCACGGCTATCAGATTCAACCACAGCACCATCAGCTTCAGGCGCTGCCACCGCAATCGCCGTTATCCCAGAAGCAGCACGAGCCGAAAGGCGAGGCGGGTTGGAATATTGATCCATTTTGTTGA 705 0.556 MSSTNSPCAACRIQRRKCTQDCVFAPYFPADNPQRFAYVHKVFGASNVAKILNELGAAQREDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLKQLQIELLDARKELASYIGPQALLPVSQSPAGALNVNVDGISTHHHNHMIGINPTHQYQMMQQHELLTMNGGGFEGASADGFNQISAANTMPPSLALGPADHGYQIQPQHHQLQALPPQSPLSQKQHEPKGEAGWNIDPFC 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0950 234 Coils Coil 86 106 - -
Dere04g0950 234 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Dere04g0950 234 Pfam Lateral organ boundaries (LOB) domain 7 101 IPR004883 -
Dere04g0950 234 MobiDBLite consensus disorder prediction 209 234 - -
Dere04g0950 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0950 Dere-ChrDere04 10098117 10098821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0950 1 140 AS2 family AT5G66870 64.865 9.84e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere04g0950 LOB 3.2e-41 No_clan