Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0938 ATGATGTCTTCAATGGGTGATCCAGCTGATGAAACCCATGAAACAAACGAGATAGATGCTAGAAGTTTGTCATCTGCACAGGGTCAGGCACCACACGTCCATAAAGTAGGAATTCCTCCAAGACAGAACCTACTCAAGGAATTTCAATACCTTGTAAAAGAAACATTCTTTGCTGATGATCCTCTACGGTCTTTCAAAGACCAGACTAAATCCCGGAAATTCGTCCTTGGCATTGAAGCCCTATTCCCCATACTTAGTTGGGGAAGAAATTACAATGCTGCCAAACTGAGAGGGGATATCATAGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTTGCAAATTTGGCTCCTGAGTATGGACTGTACTCCAGCTTTGTTCCACCACTGATTTATTCTGTCATGGGTAGTTCTCGCGATATCGCCATAGGACCTGTGGCTGTGGTTTCCCTCTTACTAGGGACTTTACTTCAGAATGAGATTGATCCAGTTGCACATCCAGCAGAGTATCGAAGACTTGCTTTCACAGCAACTTTTTTTGCGGGCATTACTCAAGCGACTCTTGGGGTCTTCAGGTTAGGTTTCTTGATTGACTTCCTGTCCCATGCTGCTATTGTTGGTTTTATGGCGGGAGCTGCCATCACAATTGCTCTTCAACAGCTTAAGGGTTTCCTTGGCATTAAGAAGTTTACAAGGAAAACCGATATCGTCTCTGTGTTGCATTCAATATTCTCAACAGCCCAACATGGATGGAACTGGCAGACTGTAGCCCTCGGAGCAAGCTTTTTGGTTTTTCTTTTGATTGCTAGATATATTGGAAAAAAGAGCAGGAAATTCTTCTGGGTGCCAGCAATCGCTCCATTGATAGCTGTTGTGCTCTCCACTTTAATTGTGTTCTTAACCCGTGCAGACAAGCAAGGTGTTGAAATTGTAAACCACATAAAGAAGGGGATCAATCCTTCATCTGTTAAACAGATATATTTTAGTGGTGATTTACTTGCGAAAGGTTTCAAGATTGGCATTGTGGCTGGCATGATAGCATTGACAGAAGCCATCGCAATAGGGAGAACATTTGCTTCTATGAAGGACTATCATCTGGATGGAAACAAAGAAATGATGGCATTAGGAGCTATGAATATTGTTGGTTCAATGACTTCCTGCTATGTGGCAACAGGTTCTTTTTCTCGGTCAGCGGTTAATTACATGGCTGGTTGCCAAACTGCAGTCTCTAATATTGTGATGTCCATCGTTGTGTTCTTAACCCTTCAATTTATTACCCCTCTTTTCAAGTTTACTCCAAATGCCATTCTTTCTTCCATCATTATATCTGCCGTAATCAGCCTAGTGGACTATCAGGCAGCGATTTTAATATGGAAGATTGATAAATTTGATTTTGTTGCTTGCATGGGAGCCTTCTTTGGGGTTGTTTTTGCCTCGGTTGAGATAGGACTTTTAATTGCTGTCTCTATATCCTTCGCAAAAATCCTATTACAAGTTACCAGACCACGAACAGCTATTCTAGGGAAGATCCCTGGGACAACTGTCTTTAGAAATACCCAACAATACCCAAAAGCGACAATGGTTCCCGGTGTGCTTATTGTAAGAGTTGATTCTGCCATATACTTTTCCAACTCCAATTACGTTAAAGAAAGGATATTGAGATGGCTGATAGATGAGGAAGAAAGAGGGAAAGGAGACTACCAAACAAGAATCCAATTTTTGATAGTTGAAATGTCACCGGTTACTGACATCGATACGAGTGGTATCCATGCCTTTGAAGAGTTATACAGAAGTCTTCAAAAGAGAGATGTTCAGCTTGTTCTCGCAAACCCTGGCCCTGTAGTGATAAACAAGCTTCATACCTCCAATTTCGCAAATCTGATCGGTGAGGACAAGATCTTCCTCACAGTTGCAGATGCTGTTGCATACTGCTCTCCAAAGCTAGCTGAAGAGCCTTGA 1980 0.4207 MMSSMGDPADETHETNEIDARSLSSAQGQAPHVHKVGIPPRQNLLKEFQYLVKETFFADDPLRSFKDQTKSRKFVLGIEALFPILSWGRNYNAAKLRGDIIAGLTIASLCIPQDIGYAKLANLAPEYGLYSSFVPPLIYSVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPVAHPAEYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKKFTRKTDIVSVLHSIFSTAQHGWNWQTVALGASFLVFLLIARYIGKKSRKFFWVPAIAPLIAVVLSTLIVFLTRADKQGVEIVNHIKKGINPSSVKQIYFSGDLLAKGFKIGIVAGMIALTEAIAIGRTFASMKDYHLDGNKEMMALGAMNIVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLQFITPLFKFTPNAILSSIIISAVISLVDYQAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPGTTVFRNTQQYPKATMVPGVLIVRVDSAIYFSNSNYVKERILRWLIDEEERGKGDYQTRIQFLIVEMSPVTDIDTSGIHAFEELYRSLQKRDVQLVLANPGPVVINKLHTSNFANLIGEDKIFLTVADAVAYCSPKLAEEP 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0938 659 MobiDBLite consensus disorder prediction 1 36 - -
Dere04g0938 659 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Dere04g0938 659 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Dere04g0938 659 Gene3D STAS domain 508 655 IPR036513 -
Dere04g0938 659 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
Dere04g0938 659 FunFam Sulfate transporter 31 508 654 - -
Dere04g0938 659 SUPERFAMILY SpoIIaa-like 530 652 IPR036513 -
Dere04g0938 659 PANTHER SULFATE TRANSPORTER 45 652 IPR001902 GO:0016020|GO:0055085
Dere04g0938 659 Pfam Sulfate permease family 96 476 IPR011547 GO:0016020
Dere04g0938 659 Pfam STAS domain 529 647 IPR002645 -
Dere04g0938 659 NCBIfam sulfate permease 83 647 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0938 Dere-ChrDere04 9844929 9848867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0938 2 658 Inorganic Solute Cotransporters AT1G22150 73.668 0.0 989
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2420 05 34574634 34581053 Dere04g0938 04 9844929 9848867 CCT
Dere04g0938 04 9844929 9848867 Dere04g0938 04 9844929 9848867 ECH