Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0845 ATGGCACCCAGTTTCGATTGTGTTTCGAGTCTTCTCTGTGCAGAAGACAACAACATTTTCGATGATAGCGATTATGGAGGTACGACGGAGCTGCTGCAGGATACATGGCATCATAGATATCATCAAATCCATAGCCAAAACGCGTGCTTTCGTGACCAAGATGATGGGTTGCCATTCCAGAGTGATGAGTGCTTAGCGCAAATGGTGGAAAAGGAATGTGAACACTTGCCTACTGGGGATTACTTGAATAGGCTTCGAACTGGGGATTTGGACTTTGGGGCCAGAAAAGACGCCATTGATTGGACTGAAAAGGTTCGAGCGCATTTCGGTTTCGGACCACTCTGTGCATATCTATCCATAAACTACCTGGACCGCTTCCTTTCTGCATATGAATTACCAAAGGGAAAAGCCTGGACAATGCAATTGTTGGCCGTGGCATGCTTGTCTCTCGCTGCCAAAATGGAAGAGACTGAAGCTCCCCTGTCTCTTGATTTACAGGTATGTGAATCAAAGTATATATTTGAAGCTAGAACAATACAGAGAATGGAGCTTCTGGTGCTGAGCACACTGACGTGGAGAATGCAAGCCATTACCCCTTTCTCCTTCATAGACTACTTTCTCAGCAAGATCAACGATGATCAGAGTCCCCAAAGAACTTCCATTTTGCGATCCATCCAAATAATATTGAGCACTGCGAGAGGGGTTGACTTCTTGGAATTCAGGCCTTCAGAAATTGCAGCAGCGGTGGCAATATTTGTTGTGGGGGAGACCCAAATGGTTAATACCGAGAAAGCAATTTCCGATCTGATTCAACATGTAAAACTGGAAAAGGAGAGAGTGTTGGAGTGCTTTAAAATGATACATGAGTTGTCATCAAACAGAAGGCCCTGTGTGCCACAAAGCCCGATAGGGGTGTTGGAAGCCGCATGCTTCAGCTATAAAAGCGATGACTCAAATGGTGGTTCATGTGCAAATTCTTCACATGATGCCCCCGATGCTAAAAGGAGGAAGCTAAACAATAACTCTGGAGTAGAGCTATTGTAG 1044 0.4511 MAPSFDCVSSLLCAEDNNIFDDSDYGGTTELLQDTWHHRYHQIHSQNACFRDQDDGLPFQSDECLAQMVEKECEHLPTGDYLNRLRTGDLDFGARKDAIDWTEKVRAHFGFGPLCAYLSINYLDRFLSAYELPKGKAWTMQLLAVACLSLAAKMEETEAPLSLDLQVCESKYIFEARTIQRMELLVLSTLTWRMQAITPFSFIDYFLSKINDDQSPQRTSILRSIQIILSTARGVDFLEFRPSEIAAAVAIFVVGETQMVNTEKAISDLIQHVKLEKERVLECFKMIHELSSNRRPCVPQSPIGVLEAACFSYKSDDSNGGSCANSSHDAPDAKRRKLNNNSGVELL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0845 347 Gene3D - 65 286 - -
Dere04g0845 347 FunFam D6-type cyclin 192 285 - -
Dere04g0845 347 SUPERFAMILY Cyclin-like 179 295 IPR036915 -
Dere04g0845 347 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Dere04g0845 347 FunFam D2/4-type cyclin 78 191 - -
Dere04g0845 347 Pfam Cyclin, C-terminal domain 197 295 IPR004367 -
Dere04g0845 347 Gene3D - 78 195 - -
Dere04g0845 347 SMART cyclin_7 100 188 IPR013763 -
Dere04g0845 347 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Dere04g0845 347 SMART Cyclin_C_2 197 314 IPR004367 -
Dere04g0845 347 MobiDBLite consensus disorder prediction 321 347 - -
Dere04g0845 347 SUPERFAMILY Cyclin-like 59 194 IPR036915 -
Dere04g0845 347 CDD CYCLIN_AtCycD-like_rpt2 197 287 - -
Dere04g0845 347 PANTHER CYCLINS 62 293 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0845 Dere-ChrDere04 8715013 8717044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0845 60 274 Core Cell Cycle Gene Families AT5G65420 56.109 2.29e-83 252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0845 04 8715013 8717044 Dere04g0845 04 8715013 8717044 ECH