Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0841 ATGATGTGGGATGAGTGGGACTACAGCATACCAGAAGGCGACCAACCTGACCAGGATTCCCATCTCAACTTTGATTTCTTCTCTGCTTTGTCGAAGCCTAAGGATTATTATAAGATATTGGAAGTGGATTATGATGCTACAGATGACGCTATTCGTTCCAATTACATTCGTCTAGCTCTGAAATGGCATCCGGACAAGCAGAAAGACCAACATGCTGCAACCTCACGATTCCAAGAGATAAACGAAGCTTATCAGGTTTTGAGCGATCCTGCCAAAAGGAGAGAGTATGACAACAATGGGATGCTCTATGTCTATGATTGCAATCTTATGGATTATCTTAACCGTCACAAGGGCCTTATATTGACGTGTAATGGTCTTGGCATGAAGCATTTCATTTGGTATTATGGTTCCACAGATTTTTTGGCTTACTGCACATCTGCCCGTGTGGGAATTTTTTCTTCTATCGTTTTGGTCGTCATTGCTTACAAAAGGCATGATGGCTTAAAATAA 510 0.4157 MMWDEWDYSIPEGDQPDQDSHLNFDFFSALSKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQHAATSRFQEINEAYQVLSDPAKRREYDNNGMLYVYDCNLMDYLNRHKGLILTCNGLGMKHFIWYYGSTDFLAYCTSARVGIFSSIVLVVIAYKRHDGLK 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0841 169 SUPERFAMILY Chaperone J-domain 31 134 IPR036869 -
Dere04g0841 169 FunFam Chaperone protein DNAj, putative 27 114 - -
Dere04g0841 169 Pfam DnaJ domain 35 97 IPR001623 -
Dere04g0841 169 PRINTS DnaJ domain signature 37 55 IPR001623 -
Dere04g0841 169 PRINTS DnaJ domain signature 55 70 IPR001623 -
Dere04g0841 169 PRINTS DnaJ domain signature 72 92 IPR001623 -
Dere04g0841 169 PRINTS DnaJ domain signature 92 111 IPR001623 -
Dere04g0841 169 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Dere04g0841 169 SMART dnaj_3 34 92 IPR001623 -
Dere04g0841 169 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 133 - -
Dere04g0841 169 CDD DnaJ 35 89 IPR001623 -
Dere04g0841 169 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
Dere04g0841 169 Gene3D DnaJ domain 27 110 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0841 Dere-ChrDere04 8695325 8697848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0841 28 99 C2H2 Transcription Factor Family AT1G74250 41.558 7.01e-12 60.8