Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0833 ATGCAGACGGCGAGCCCCGGCGCCACCGTAGAGGAGGCCAAGAAACCCAAGGGCCGCCCAAAAGGCTCCAAGAACAAGCCCAAGCCCCCTCTTGTCGTACCCCGTGGTGATATAACTCCGTACATTCTCGAAATCGCTCACGGCAACGACGTCGTCGAAGCTATCTCCCAGTTTAGCCGTCGCAAGAAAACCGGCCTCTGTATACTAACTGCTTCCGGTGTCGTCCTTAACGCCGCCGTACGTCCGTCCTGGGCCGGTGTCGCACCTGTCGTCACTTGTCCCGACTATTACCTCATCCTCTCCATATCCGCCGCCTTCGCCCCTCACGAATCCCCCACTTCGCCGTCCGCCCCCAAACCCCTCACCGTCTCGCTCGCCGCCCCTAACGGCCACGTCATCGGAGGACTGGTCTGCGGCCGTTTGCTCGCTGTGGGCTCAGTGTTCGTGATAGCCATTTCGTTCAACAGCCCATCGTATTATGTGCTGGCTAATGAAGATGCCGAGAGCGTGGCCCACGGAGGAGAAAGAGGGCACGCGCCGCTGCCTCTGTCTGGTGGGATGCCTATTTATAATGATAACCTTCAGCTGCCGTTCGATGGGCTTTGGTCTGCAGTGGGTAGACCATCAGAACCAACGCCTTCGACGTCTTCTCATGGGTTTAACTTGCCGGTTTAG 675 0.5852 MQTASPGATVEEAKKPKGRPKGSKNKPKPPLVVPRGDITPYILEIAHGNDVVEAISQFSRRKKTGLCILTASGVVLNAAVRPSWAGVAPVVTCPDYYLILSISAAFAPHESPTSPSAPKPLTVSLAAPNGHVIGGLVCGRLLAVGSVFVIAISFNSPSYYVLANEDAESVAHGGERGHAPLPLSGGMPIYNDNLQLPFDGLWSAVGRPSEPTPSTSSHGFNLPV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0833 224 ProSiteProfiles PPC domain profile profile. 35 177 IPR005175 -
Dere04g0833 224 MobiDBLite consensus disorder prediction 208 224 - -
Dere04g0833 224 CDD DUF296 39 154 IPR005175 -
Dere04g0833 224 MobiDBLite consensus disorder prediction 1 33 - -
Dere04g0833 224 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 173 IPR014476 GO:0003680
Dere04g0833 224 SUPERFAMILY AF0104/ALDC/Ptd012-like 37 165 - -
Dere04g0833 224 MobiDBLite consensus disorder prediction 205 224 - -
Dere04g0833 224 Gene3D - 40 168 - -
Dere04g0833 224 Pfam Plants and Prokaryotes Conserved (PCC) domain 40 155 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0833 Dere-ChrDere04 8565523 8566197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0833 8 186 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 48.387 5.18e-47 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0833 04 8565523 8566197 Dere04g0833 04 8565523 8566197 ECH