Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0827 ATGAACGCTAACAGAGTTGAATCCGAACGGTTGCTTGGGATCGCTGAAAAACTCTTACAGAACCGGGATCTCAGCGGCTCAAGGGACTTTGCCAATTTAGCCCAGGAAGCTGAACCCCTTTTAGAAGGTTCAGATCAGATCTTGGCCGTCATCGACGTGCTACTCGCGGCGGAGAAACGCGTCAACAACCACCACGACTGGTACGCCATTCTCCAGGTGGATCGCCGATCCAACGACTTCGATTTCATCAAGAGGCAGTATCGTCGACTCGCGCTTCTCCTCCACCCAGACAAGAACAGGTTTTCCCTCGCCGATCACGCTTTCAGGCTCGTCGCCGAGGCATGGGCTGTGCTATCGGACCAGGTTAAGAAGTCCCACTTTGACAAGGAGCTCAGCTTCTTTACCAGGGTCGATTTGAGTGTGCCTAGCTGGGTTCAACAAGACAAATTGCCGGTTCGTAGGGGTGGGCCTGGGCCCAGTGGAAGGAATCAAGGTTATGATACGAGGAATGGTAGCAACGGCGAGAGGGAGGACGAAGCGTATGAGAACCCTCGACGGAGATCGACCTTCTGGACTACATGTCCGTACTGTTACTACTTGTACGAGTACCCTAAGATTTACGAGAATTGTTGTTTGAGGTGCCAGAATTGCGAGAAGTCCTTCCACGGGGTTTTGATTCCGTCTTTGCCGCCTCTTGTGCCGGGACAAGACGCTTATCATTGTTGCTGGGGTTTCTTTCCAATGGGATTCTTCGTTGGAAATTCGGGTGGTAAGGGGGCAGCGCCACCCACAGAGTCACCCAATTGGATGCCACCGGTCTCAGCTGCGCCGGTAGAGAATAGTAGGTATAACGGGCAACCGGCCGCCCCAAGGGCTGCGGCACCGAGGGGGGCAGCGGCGGTTGTTTCAAATGGGACTGCTTCAGGATTGGGTTTTCCTAAGCGGAAGCGAGGAAGGCCTCGGAAAAATCCTTTGCCGGCTTGA 984 0.5407 MNANRVESERLLGIAEKLLQNRDLSGSRDFANLAQEAEPLLEGSDQILAVIDVLLAAEKRVNNHHDWYAILQVDRRSNDFDFIKRQYRRLALLLHPDKNRFSLADHAFRLVAEAWAVLSDQVKKSHFDKELSFFTRVDLSVPSWVQQDKLPVRRGGPGPSGRNQGYDTRNGSNGEREDEAYENPRRRSTFWTTCPYCYYLYEYPKIYENCCLRCQNCEKSFHGVLIPSLPPLVPGQDAYHCCWGFFPMGFFVGNSGGKGAAPPTESPNWMPPVSAAPVENSRYNGQPAAPRAAAPRGAAAVVSNGTASGLGFPKRKRGRPRKNPLPA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0827 327 ProSiteProfiles dnaJ domain profile. 66 131 IPR001623 -
Dere04g0827 327 SMART dnaj_3 65 123 IPR001623 -
Dere04g0827 327 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 291 - -
Dere04g0827 327 MobiDBLite consensus disorder prediction 149 182 - -
Dere04g0827 327 CDD DnaJ 66 120 IPR001623 -
Dere04g0827 327 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Dere04g0827 327 PRINTS DnaJ domain signature 103 123 IPR001623 -
Dere04g0827 327 PRINTS DnaJ domain signature 68 86 IPR001623 -
Dere04g0827 327 PRINTS DnaJ domain signature 87 102 IPR001623 -
Dere04g0827 327 MobiDBLite consensus disorder prediction 273 327 - -
Dere04g0827 327 Gene3D DnaJ domain 54 138 IPR036869 -
Dere04g0827 327 Pfam DnaJ domain 66 128 IPR001623 -
Dere04g0827 327 SUPERFAMILY Chaperone J-domain 60 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0827 Dere-ChrDere04 8518025 8519008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0827 2 325 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 49.709 6.03e-102 301