Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0814 ATGCCTCACAGAGCGACTTACATTTTCCCAAGGCAATTCCCGGACCGTAGGTTGGATGAATCTTCCAAACAGCTATCAGATCACGAGAAGAAGAAGATCATCGACTCTATCAAATCAGGAACCTTTGGCGTTGAAGGCTATAACACAAAAAAGCCGCCACTGACAACTACTCCCACAAAAAACGATGTGGTTTACTCGTCAAGTAAACACTCAGCTGTATCCGATCTTTTCACGGGCGGTGAGAAGCTTCGAACCAAACACAAGCAAATTGTTGATTTCTGCGATTGGTTGATAGAGAAAAAGGGGGGAAGATCGGGTCACGTGAATCCGTACTCTCACCGATCATCCAGCGAAGAAGACCGCGAGCTTCTGCTTCCTCCGGAGTCGGTGCCAGCACCGCCTCCGCCGGAGACAGTGAAGGATTCTGCCATTGACAGGAATTTTGATCGGACCGTATCGTTACCGAGGTTGTCCAGTAATGGGAGTAGCTATGCCGGGAGCTTGTTCTCAGGGACAACGTTGGATGGAATTTTTTCCTGCGACATTAAGGAGGAGACGACGTCGTCAGTCTTCACCACGACGAGGAAGCAAGAGGAAGTTGAGGAAGAGAGTAAAAAAAGGATGGTGCAGAAGTCCAAAGAGAGCTACTACCTGCAACTTACGTTGGCTAAGAGGCTCACTTGTCTAGCAAGTATTGCTACTGATCCTGTGCTTACTCTAGACGCTAAAATTGACACTTGGGATGCCGAATCCGTTTCTTATCGTTTATGGGTGAGCGGCTGTTTGTCATACTCCGACAAGATATCGGACGGTTTTTATAACATATTAGGGATAAATCCGTATCTGTGGGTAATGTGCAATGAAGCGGAGGAAGGAGGACGGCTCCCACCTCTCATGGCGCTTAAAGCAGTTGAACCTAGCGAGACCTCTATGGAGGTGATTGTTGTTGATATACATGAGGATTCTCGGCTAAAGCAACTTCAGGATAAAGCACAGGAATTGTATTGCGCTTCAGAGAACACCTTGGTGTTGGTGGAAAAGCTAGGAAAGCTTGTTGCCATATATATGGGTGGTACCTTTCCGGTGGAGCATGGAGATCTCCACAAGCGCTGGAAGTTGGTTAGTAAGAGATTGAGGAATTTTCACAATTGTGTTGTGCTCCCTATCGGCAGCCTATCTTCTGGACTTTGTAGGCATCGGGCAATTCTCTTCAAGAGGTTGGCAGATTACATAGGTTTGCCGTGTCGTATTGCTCGAGGTTGCAAGTATTGTGCTGCAGACTATAGATCCTCTTGCCTTGTCAAGATTCAAGATGACAGGCAGTTCTCTAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGATATGTCCACGGACCAGATTCCTCTATTAATGGAGCATATGTCTCTTCAATGCCTTCCCCATTTCAAATTTCTCATTTAAAAGGATCCCAATCACCCTGTATGGACGTTGCAGCCTGTTCTCAACCTATAAGTTCCAAACATAGTTCTGTTGTTCCTGACAGTCATTTATATTCAGGCTGTGGACAAAACAATCAACAAGTTAATGAAACTGATATGCTGAAAATTCCCGAGGGCTCCATTTATGCTTCAGTTGATCAAACTTCGGAAGGAACTGTACCTTCTCTGATTCCTTTTGGCTTAAAAAGGAAAGCTGAGGAAGCTGCAGTTCTAGGTTCAATTTTGCCTTCCATATGGGAAGGTGTTTCAGAAGCTCTGCATCCACCCATGAAGGCATCATTACATGAATACCCCAGGCTTAGTGAAGATACAGTTGCTGTACAACAAACTTCCAAGAATGAGATTATTTTAACTGATAGTTCTGTGGTTAAAAGTACTCTAAAAGAATGTGTACTGAGTTCTTCAAGCCAATCAGAACTGGAGAATGTAGACAATAGACCTGAAAACCGGAGCTATTTTCCTGCTGGAAATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGGATTAGAGAGCGTGTTGGTGCTGGTTCATTCGGGACGGTGCACCGTGCTGAATGGCATGGATCAGATGTTGCAGTCAAGGTTTTATCAGTTCAGGATTTCCATGATGATCAATTGAAAGAGTTTCTGAGAGAGGTTGCAATAATGAAGCGTGTACGCCATCCAAATGTGGTGCTCTTCATGGGTGCTGTTACAAAACGCCCTCATCTATCCATAGTGACAGAATATTTGCCTAGGGGTAGTTTATACCGCCTAATACATAGACCCACGTCTGGCGAAAATTTGGATCAAAGGAGAAAATTACGAATGGCTTTAGATGTGGCTAAAGGGATTAATTATCTCCACTGTCTGGACCCGCCAATTTTGCATTGGGATCTCAAATCCCCGAACTTGTTAGTGGACAAAAATTGGACCGTAAAGGTGGGTGATTTTGGACTGTCGAGATTTAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCTGAGTTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTCATCCTGTGGGAACTTGTGACCATGCAACAGCCGTGGAGTGGTCTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTGTTATCCCTCCAAACATCTCCCCGGCATTGGCCTCTCTCATGGAATCGTGTTGGGCTGATGACCCTAACGAACGACCATCTTTCTCTAACATAGTGGACTCGCTAAAGAAGCTGCTTAAGTCTCCAGCAGAGGTGATAAAAATGGGTGGGGCATAA 2835 0.4511 MPHRATYIFPRQFPDRRLDESSKQLSDHEKKKIIDSIKSGTFGVEGYNTKKPPLTTTPTKNDVVYSSSKHSAVSDLFTGGEKLRTKHKQIVDFCDWLIEKKGGRSGHVNPYSHRSSSEEDRELLLPPESVPAPPPPETVKDSAIDRNFDRTVSLPRLSSNGSSYAGSLFSGTTLDGIFSCDIKEETTSSVFTTTRKQEEVEEESKKRMVQKSKESYYLQLTLAKRLTCLASIATDPVLTLDAKIDTWDAESVSYRLWVSGCLSYSDKISDGFYNILGINPYLWVMCNEAEEGGRLPPLMALKAVEPSETSMEVIVVDIHEDSRLKQLQDKAQELYCASENTLVLVEKLGKLVAIYMGGTFPVEHGDLHKRWKLVSKRLRNFHNCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCKYCAADYRSSCLVKIQDDRQFSREYVVDLVGEPGYVHGPDSSINGAYVSSMPSPFQISHLKGSQSPCMDVAACSQPISSKHSSVVPDSHLYSGCGQNNQQVNETDMLKIPEGSIYASVDQTSEGTVPSLIPFGLKRKAEEAAVLGSILPSIWEGVSEALHPPMKASLHEYPRLSEDTVAVQQTSKNEIILTDSSVVKSTLKECVLSSSSQSELENVDNRPENRSYFPAGNIPRYLNLEPSLAMDWLEISWDDLRIRERVGAGSFGTVHRAEWHGSDVAVKVLSVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPTSGENLDQRRKLRMALDVAKGINYLHCLDPPILHWDLKSPNLLVDKNWTVKVGDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLSPAQVVGAVAFQNRRLVIPPNISPALASLMESCWADDPNERPSFSNIVDSLKKLLKSPAEVIKMGGA 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0814 944 ProSiteProfiles Protein kinase domain profile. 674 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0814 944 SUPERFAMILY Protein kinase-like (PK-like) 648 927 IPR011009 -
Dere04g0814 944 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 255 933 - -
Dere04g0814 944 Pfam Ethylene-responsive protein kinase Le-CTR1 249 457 - -
Dere04g0814 944 FunFam Serine/threonine-protein kinase isoform 1 664 752 - -
Dere04g0814 944 SMART serkin_6 674 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0814 944 CDD STKc_MAP3K-like 680 928 - -
Dere04g0814 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Dere04g0814 944 ProSitePatterns Protein kinases ATP-binding region signature. 680 701 IPR017441 GO:0005524
Dere04g0814 944 Gene3D Transferase(Phosphotransferase) domain 1 753 940 - -
Dere04g0814 944 MobiDBLite consensus disorder prediction 105 142 - -
Dere04g0814 944 Pfam Protein tyrosine and serine/threonine kinase 675 928 IPR001245 GO:0004672|GO:0006468
Dere04g0814 944 PRINTS Tyrosine kinase catalytic domain signature 748 761 IPR001245 GO:0004672|GO:0006468
Dere04g0814 944 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Dere04g0814 944 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Dere04g0814 944 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Dere04g0814 944 FunFam Serine/threonine-protein kinase CTR1 753 938 - -
Dere04g0814 944 Gene3D Phosphorylase Kinase; domain 1 667 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0814 Dere-ChrDere04 8397100 8405882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0814 1 943 MAP Kinase Kinase Kinase AT4G24480 57.520 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dere04g0814 PK_Tyr_Ser-Thr 2.7e-65 CL0016