Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0790 ATGGAGAACTATTCCTACTCTTCCTACCCTGATTCCCGTGATTCCTCCCCGAGGTCTCGCGAAATCGACCCCGAGAACCCCTCATGGGATGAACCTAGCAATAACAGCAACGCCACCGCCACCAACTACAAAGTCAAATTTATGTGCAGCTATGGCGGAAAAATCCAACCCCGGCCCCACGATAACCAGCTTGCTTACATCGGTGGGGATACCAAGATCTTAGCCGTTGATCGCACCATCAAGTTCGCCGCTCTCATGGCCAGGCTCTCTTCTATCTGCGATGCCGACGTTTGCTTCAAGTACCAACTTCCAGGTGAGGATCTCGATGCTTTGATTTCCGTCACTAACGATGAGGATCTCGAGCACATGATGGTTGAGTATGACCGCTTGTACCGTGCCTCCGCTAAGCCCGCTAGGTTGAGGTTGTTTCTTTTCCCGCTGACCTCATCGGCTCCGGGGAGTTTCGGGTCGAGCGAATTGAAATCGGAGCGGCAGTGGTTTGTGGATGCTCTCAATTCTGTGCAGATTCAGCAAGTGGACGGTTCGTCACCGCCGGCGCCGGTGTCGGCAACGAATCCGGATTTTCTGTTTGGGTTGGATAAAGGTTATCCGGGGGTTCCAGCGACGAAATTGCCTGATTCTGCTCCTGTTCCAACGGTTCCAGATGTAGTGGCGAAGGATTTCTCAGCGGGATCAGAATGTGGATCGGAGGATCGGCACGTGGTTGGGGAACCATTGCTCTCGCCCGCCGAGATTCAAAGACAGATCCAGGATTTGCAGAGATTGCAGATTGCGAACAATGAACAACTCCTGCAGCGGAAAAGCGATGAAGGTAATGGCAGAGTTTATACTATGGATTATTACTCTCAGAAAAATCCAGAGAAAGTGGCGCCGCCACCAGCGCCGGCGCATGCACATACTGGTCCAGTGCCAGTTCCTGTACCAGTATCAGTCCCGGCGTCGGCGTCCGCAGCGTTTTTGCCTGAACGACATATGACAAGTACTGGTTTTCCATTGGCGGCTTCTGCAACTGGAACTGATCAGCAGCAGCCGGTGTATCTCATTCCAACACCGGCTGGAATGTACCATGCCACTACTTTGCGACCCATGACTGGAGCAGTTGGTCAGCCTTACTATGGAGTCCAGAGAATGGTCAAGGCAGAAATGTACAATGCAGCCCCACCGTCGTCTCATTCACATTCCCAAGCCAAAGTTGGGGCTTACACTGAAACTTCCGGAATGCTACAACAGCCAAAGGTTGTAGTGTCTGAGCCTGGATTTGCCCAGGTGGCCTACGATAATGCAGGCAGGCAGGTCTACTATGCAGCGACGGGCCCGGCACCGGGTGGGGTGGTGCCACCATACCAGGTGGTAACAGCTGGAGTTGATGGGAGACAACAAGGCGGTGGGGCCTTGAATCAAGAGGGTAAGGTTGTTACCAAAGTTTCTTCTGCTGTGTGA 1461 0.5305 MENYSYSSYPDSRDSSPRSREIDPENPSWDEPSNNSNATATNYKVKFMCSYGGKIQPRPHDNQLAYIGGDTKILAVDRTIKFAALMARLSSICDADVCFKYQLPGEDLDALISVTNDEDLEHMMVEYDRLYRASAKPARLRLFLFPLTSSAPGSFGSSELKSERQWFVDALNSVQIQQVDGSSPPAPVSATNPDFLFGLDKGYPGVPATKLPDSAPVPTVPDVVAKDFSAGSECGSEDRHVVGEPLLSPAEIQRQIQDLQRLQIANNEQLLQRKSDEGNGRVYTMDYYSQKNPEKVAPPPAPAHAHTGPVPVPVPVSVPASASAAFLPERHMTSTGFPLAASATGTDQQQPVYLIPTPAGMYHATTLRPMTGAVGQPYYGVQRMVKAEMYNAAPPSSHSHSQAKVGAYTETSGMLQQPKVVVSEPGFAQVAYDNAGRQVYYAATGPAPGGVVPPYQVVTAGVDGRQQGGGALNQEGKVVTKVSSAV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0790 486 MobiDBLite consensus disorder prediction 1 37 - -
Dere04g0790 486 Pfam PB1 domain 60 146 IPR000270 GO:0005515
Dere04g0790 486 CDD PB1_UP2 48 145 - -
Dere04g0790 486 Gene3D - 65 146 - -
Dere04g0790 486 SUPERFAMILY CAD & PB1 domains 60 151 - -
Dere04g0790 486 SMART PB1_new 59 147 IPR000270 GO:0005515
Dere04g0790 486 PANTHER OS05G0427100 PROTEIN-RELATED 8 382 - -
Dere04g0790 486 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 64 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0790 Dere-ChrDere04 8061657 8063117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0790 43 174 MAP Kinase Kinase Kinase AT5G57610 44.444 6.38e-30 122