Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0777 ATGTCTCATTCCTTGCGTGCTCCTCCCTCCAACATGTTTCTCTCTCTTTGCTACCTCCTTTGTTTCTCTTTCCTCTCCGGTGTTCAATCCGACGACCGTCAACTACTTCTCCACATGAAATCCGCACTTGACAAGTCAACTTCGGTTGTCTTTGACTCATGGAATTCCAACAACTCCGTATGTAATTTCGATGGGATCACCTGCAACTTAGACGGCTCGGTGACGGAAATCGACCTCTCCAACCAGAAGCTATATGGGTTTCTTCCTTTCGACTTCATTTGCCAGCTTCAATCACTCGAGAGGCTCTCATTCGGGTTCAACTACTTGTATGGCAGAGTTGCAGAGAGTTTGAAGAACTGTGTCAAGTTACGATACTTGGACTTGGGAAACAACAATTTTTCGGGACCATTTCCGGACATATCTCCTCTCCACCAATTGCAGTATCTGTATGTGAATCAAAGCGGATTTTCTGGAACTTTTCCGTGGAAGTCTCTGCTAAATATGACAGGACTGGTGCGACTAAGCGTTGGGGATAACCCTTTTGACCGAACTCCTTTTCCATCTGAGGTAGTGAATCTTAAAAATCTCAATTGGCTCTATCTAACGAATTGTAGCCTCGAAGGGAAAATACCAGCGGGAATAGGTAATCTCACGGAGCTAATAAATTTTGAGATTTCGGACAATTATATATCCGGTGAGATACCGTCGGAGGTTGGGAAGCTTCAGAAGCTATGGCAGTTTGAGTTCTACAATAACGCAATCACGGGAAAGTTTCCAATCGGGTTAAGAAATCTCACAAGCCTTGAGAAATTGGATGGGTCCATAAATCAGCTCGAAGGCGATCTTTCCGAGTTGAGGTTCTTGACGAATCTAGTTTCTCTGCAACTGTTTCAAAACAATTTATCAGGGGAAATTCCACCAGAGTTTGGTGAATTCAAAAAACTCGTGAATCTCTCTTTGTACACTAACAGCTTGTCGGGACCCATTCCTCAGAAACTTGGCTCTTGGGCAGAGTTTGATTTCATTGACGTGTCCGAGAACATGTTGACGGGTCCTATTCCGCCTGATATGTGCAAACAGGGAAAGATGCATGGACTGCTAGTGCTTCAGAACAAGCTCACCGGAGAAATACCAGCCACTTATGCGAACTGTATGACTATGCGTCGATTCAGAGTGAGTAAGAACTTGCTTTCGGGGACGATTCCTTCTGGAATATGGGGATTGCCGAACGCGGAGTTAATCGATATTGAACTGAATCAGTTGGAAGGTTCAATTACGTCAGATATCCTGAACGCAAAGGCCCTTGCTCATATATATGCGAGAAGGAATAGCTTGGCCGGTGAGATACCAGAAGAAATTTCAGAAGCGACGTCGTTGGTGACGATTGATCTCAGCGAGAATCAAATTTCCGGGGAAATTCCATCGGGTATTGGGGAGTTGAAACAATTGAGCAGTCTTCATCTACAGAGCAACAGGTTATCTGGGTCAATACCAGACTCTTTGGGTTCGTGTAATTCTCTCAGTGATATCGAACTGGCAAAGAATTCACTCTCCGGAAAAATTCCTTCCTCTTTGGGTCATTTACCGGTTCTTAATGCATTGAATTTGTCCCAAAACGAACTCTCCGGTGAGATTCCGGCCAGTTTGGCCCTCCTCCGGCTGAGCCTTTTTGATCTATCGAATAACCGATTAATGGGTCCTATCCCACCATCTCTATCCATTCAAGCTTACAATGGTAGTCTTGATGGAAACCCAGGTCTCTGCACACTTGACGCGATCAACACTTTCAGACCTTGCTCTGCTCATTCCGGCATGTCCAGAAACGTCCGTACACTCATCATTTGCTTTGCAGTCGCTTTAATCATGCTCCTCGGTTGTCTGGCTCTTTACTTGCAGCTGAAGAAGAGGGAGAAATATCGAGAACGCTCTTTGAAGGAAGAATCCTGGGACGTGAAATCCTTCCACGTGCTTAGTTTCACAGAGGATGAGATTCTGGATTCCATTAAGCAAGAGAATCTAATCGGGAAAGGAGGATCCGGAAACGTGTACAGGGTCCCACTCTCAAACGGTAAAGAACTCGCCGTTAAGCACATATGGAATATGGATTCCGGCGGCCGGCAGAAGAGCCGGAGTAGTTCTCCAATTATCGGAAAGCGTGAGGGGAAGTCCAAGTCCAAAGAATTCGACGCAGAGGTGCAGACCCTGAGCTCCATAAGACATGTCAACGTCGTGAAGCTTTATTGCAGCATCACAAGCGAGGGTTCCAGCTTGCTGGTGTATGAATATTTGCCGAATGGTAGCTTATGGGATCGGCTTCACACAAACGAGAAGATGGAACTTGACTGGGAAAAAAGGTATGAAATCGCAGTTGGAGCAGCGAAGGGGTTGGAGTACCTCCATCATGGGTGCGAGAGGCCTGTGATTCATAGGGACGTCAAGTCCAGCAACATTTTGTTGGACGAATTCTTGAAGCCTAGGATTGCTGATTTTGGACTTGCCAAGATTGTTCAAGCCAATATTAGCCAGGATTCTACACATGTCATCGCCGGAACACATGGGTACATTGCTCCCGAATATGGGTACACATACAAAGTGAACGAGAAAAGTGACGTGTACAGCTTTGGAGTGGTATTGATGGAGCTGGTGACGGGGAAGAGACCAATAGAAGCAGAGTATGGGGAAAACAAAGACATAGTGAGTTGGGTGTGCAGTAAGGTGCAGAGCAAAGACAGCATTATGAGTGTGGTGGACTCCAGAATAGCGGTCATGCATAAAGAGGAGGCTGTGAAGATGCTGAGAATAGCCATTCTGTGCACTGCAAGGCTTCCTGCTTTAAGGCCCACCATGAGAAGTGTGGTTCAAATGCTTGAGGATGCTGAGCCTTGTAAATTGGTTGGAATCCTCATTAGCAAAGACGCCACTGAAAAGAAAATGGGGGACTCTAACACACCTATGCTCAAGCCAAGCACCTAA 2973 0.4595 MSHSLRAPPSNMFLSLCYLLCFSFLSGVQSDDRQLLLHMKSALDKSTSVVFDSWNSNNSVCNFDGITCNLDGSVTEIDLSNQKLYGFLPFDFICQLQSLERLSFGFNYLYGRVAESLKNCVKLRYLDLGNNNFSGPFPDISPLHQLQYLYVNQSGFSGTFPWKSLLNMTGLVRLSVGDNPFDRTPFPSEVVNLKNLNWLYLTNCSLEGKIPAGIGNLTELINFEISDNYISGEIPSEVGKLQKLWQFEFYNNAITGKFPIGLRNLTSLEKLDGSINQLEGDLSELRFLTNLVSLQLFQNNLSGEIPPEFGEFKKLVNLSLYTNSLSGPIPQKLGSWAEFDFIDVSENMLTGPIPPDMCKQGKMHGLLVLQNKLTGEIPATYANCMTMRRFRVSKNLLSGTIPSGIWGLPNAELIDIELNQLEGSITSDILNAKALAHIYARRNSLAGEIPEEISEATSLVTIDLSENQISGEIPSGIGELKQLSSLHLQSNRLSGSIPDSLGSCNSLSDIELAKNSLSGKIPSSLGHLPVLNALNLSQNELSGEIPASLALLRLSLFDLSNNRLMGPIPPSLSIQAYNGSLDGNPGLCTLDAINTFRPCSAHSGMSRNVRTLIICFAVALIMLLGCLALYLQLKKREKYRERSLKEESWDVKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYRVPLSNGKELAVKHIWNMDSGGRQKSRSSSPIIGKREGKSKSKEFDAEVQTLSSIRHVNVVKLYCSITSEGSSLLVYEYLPNGSLWDRLHTNEKMELDWEKRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANISQDSTHVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEAEYGENKDIVSWVCSKVQSKDSIMSVVDSRIAVMHKEEAVKMLRIAILCTARLPALRPTMRSVVQMLEDAEPCKLVGILISKDATEKKMGDSNTPMLKPST 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0777 990 Gene3D Ribonuclease Inhibitor 360 605 IPR032675 -
Dere04g0777 990 SMART serkin_6 668 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0777 990 Pfam Leucine rich repeat 482 541 IPR001611 GO:0005515
Dere04g0777 990 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Dere04g0777 990 Gene3D Ribonuclease Inhibitor 141 359 IPR032675 -
Dere04g0777 990 SUPERFAMILY L domain-like 285 588 - -
Dere04g0777 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Dere04g0777 990 Gene3D Phosphorylase Kinase; domain 1 651 762 - -
Dere04g0777 990 Gene3D Transferase(Phosphotransferase) domain 1 763 966 - -
Dere04g0777 990 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 763 972 - -
Dere04g0777 990 SUPERFAMILY L domain-like 50 358 - -
Dere04g0777 990 CDD STKc_IRAK 674 957 - -
Dere04g0777 990 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Dere04g0777 990 MobiDBLite consensus disorder prediction 703 724 - -
Dere04g0777 990 ProSiteProfiles Protein kinase domain profile. 668 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0777 990 FunFam Receptor-like protein kinase HAIKU2 651 762 - -
Dere04g0777 990 Gene3D Ribonuclease Inhibitor 31 140 IPR032675 -
Dere04g0777 990 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Dere04g0777 990 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Dere04g0777 990 FunFam Leucine-rich receptor-like protein kinase family protein 188 284 - -
Dere04g0777 990 SUPERFAMILY Protein kinase-like (PK-like) 659 957 IPR011009 -
Dere04g0777 990 Pfam Protein kinase domain 670 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0777 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 214 957 - -
Dere04g0777 990 FunFam Leucine-rich repeat receptor-like protein kinase TDR 285 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0777 Dere-ChrDere04 7894199 7897257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0777 1 976 Receptor kinase-like Gene Family AT1G09970 63.951 0.0 1224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere04g0777 Pkinase 2.1e-42 CL0016