Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0776 ATGGATGGTCAAATCATTTTCTTTCTTATTCTTATTTCAATATCTTGTATTCCACAAGTTGTTAGTACCGACACCAACCAGTCTCAGTTTTTTGCTCACATGAAGGAGTCTTTCCCCGGAAACTACCCTTCCGATTGGGATGTCGCCAGAGGAAAACCTGTTTGCAACTTCACTGGAGTTACCTGCAACAACAAAGGAGAAGTCATCAATCTTGACGTCTCGGGTTGGTCGCTTTCTGGGGACTTCCCGGAAGATATATGCTCTTACTTGCCAGAGTTACGTGTTCTGCGTCTCAGCAATAACCGCTTCAGGGGGAAGTTTCCCCACACCATAGTCAACTGTTCCCACTTGGAAGAGATTAACATGAGCAACATGTTTCATGCTGGAACACTTCCTGATTTCTCACCTTTGACATCTCTCAAGATTCTTGATTTATCTTACAACGTCTTCACTGGTCGGTTTCCCATGTCCGTGTTCAATCTCACCAATCTTGAGGTCGTTAACTTCAACGAAAATGGAGGTTTTAACTTATGGCAGCTGCCTGATGATATTTACAAGCTCAAAAATCTCAAGTCCATGGTGTTGACGACATGCATGGTGCAAGGCTCAATCCCATCATCCATAGGGAACCTTACGTCTCTTGTTGATCTTGAATTGAGTGGAAATTACCTAACTGGTCATATTCCTGCAGAGCTTGGAAAGCTGAAAAATCTGCAACAGCTTGAGCTTTACTATAATAATCTTGTTGGGACTATACCTGAGGAGCTAGGAAATCTCAAGGAGCTCAGAGACTTGGATATGTCAGTCAATAAGTTGACTGGGAATATCCCAGAGTCTATATGTCGCCTTCCCAAGCTTGAAGTCATGCAGCTTTACAACAATAGCCTCGCAGGAGAAATCCCAGCTATGATAGCAAACTCCACATCATTAAGAATATTGTCTCTTTATGACAATTTCCTGAGCGGCCAACTCCCTAGAAATCTGGGTAAATTCTCCGGACTAGTAGTCTTAGACTTGTCTGAGAACCAACTATCTGGTCCATTGCCAACAGAGGTTTGCAAGGGAGGTAAACTGCTCTATTTTCTTGTTCTGGATAACCAGTTTTCTGGAGAAATACCAGACCATTATGCAAAATGCTTGACGCTTTTGCGGTTCAGAGTGAGTAATAACCACTTGGAGGGCACAATTCCCACTGGTCTCTTTGGCTTGCCACATGTTTCAATAATTGATTTGGCTTACAATAATTTGTCTGGTTCAATTTCTGAGACCATTGGAAGATCTAAAAACATGTCAGAGCTTTTCATACAGACGAACCAAATTTCAGGACTCATACCTCCTACGATCTCTCGTGCTACTAATCTGGTCAAGATCGATTTCAGTAATAACCTTTTGTCTGGTCCAATACCTTCTGAAATTGGAAACCTGAAAAGGCTTAATTTACTGATGTTGCAAGGGAATAAGCTGAATTCTTCCATCCCCAAATCACTGTCTTTATTGCAGTCTCTCAACGTTCTTGATCTCTCCAACAACCTCTTCACTGGGAGCATCCCTGAGAGTCTCTCTGCACTCCTACCCAACTCTATCAACTTCTCAAACAATTTGCTTTCTGGTTCAATTCCTCCCTCATTGACAAAAGGAGGGTTATTAGAAAGTTTTTCAGGAAATCCTGGTCTCTGTGTGTTGCCAGTTTATGCTAACTTGTTAGACCAGAAATTCCCTGTATGTTCACATACTGACGACAGAAAGAGGCTAAATGTCATCTGGGTAGCTGCAATTGCGGTAGCTTCGATCATCATTGGATTTGGAGCTGCATGGTTCCTAAAACGGAGGCCTACCAAAGAGAGGGCTGTTATGGAACAAGATGATGAGACACTATCTTCTTCATTCTTCTCTTATGACTTGAAGGGCTTTCACAGATTAACTTATGACCAGCAGGAGATCATTGAGGCCATGGTGGATAAGAATATAGTGGGGTATGGTGGATCTGGGACAGTGTACAAGATTGAGTTGAAGAGCGGCGAACTTGTTGCAGTCAAGAAGCTGTGGAGTCGAACATCAAAGGATTCGGCTCAAGAGGGTAGCCTGGTTTGGGACAAGGAGCTGAGAACTGAGGTTGGTACCTTGGGAAGTATAAGACACAAGAATATAGTCAAACTGTACAGCTACTTCTCGAGCTTTGACTGCAGCTTCTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATGCCTTGCACAAAGGTTGGATCCATTTGACCTGGCCTACTCGCCATCAGATTGCACTGGGGATTGCACAGGGTTTGGCTTACCTCCACCACGATTTGCTTCCTCCAATTATCCATAGAGACATCAAATCCACTAACATCCTTCTGGATGTTAATTACCAACCCAAGGTTGCAGATTTCGGAATCGCCAAGGTACTACAAGCAAGAGGAGGGAAAGATTCCACAACTGTCATTGCAGGAACCTATGGTTATTTAGCCCCAGAATATGCATATACGTCCAGAGCAACAACCAAGTGTGATGTATACAGTTTTGGGGTGATTCTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTCGGAGAGAACAGGAATATTGTATATTGGGTTTCAAACAAAGTAGACAGCAAGGAAGGGGTTAACGAAATAATAGACAAGAGATTATCAGGGTTATTCAGGGACGAAATTATACAAGTGATCCGAATTGCTATTAAATGCACCTACAAAGCCCCAGCTAATCGACCAACCATGAAAGAGGTGGTTCAGCAACTGATCGAGGCAGACCCATGCAAATTCGACTCTTGCAAGTTGTCAGATAAGACCAAATAA 2841 0.4294 MDGQIIFFLILISISCIPQVVSTDTNQSQFFAHMKESFPGNYPSDWDVARGKPVCNFTGVTCNNKGEVINLDVSGWSLSGDFPEDICSYLPELRVLRLSNNRFRGKFPHTIVNCSHLEEINMSNMFHAGTLPDFSPLTSLKILDLSYNVFTGRFPMSVFNLTNLEVVNFNENGGFNLWQLPDDIYKLKNLKSMVLTTCMVQGSIPSSIGNLTSLVDLELSGNYLTGHIPAELGKLKNLQQLELYYNNLVGTIPEELGNLKELRDLDMSVNKLTGNIPESICRLPKLEVMQLYNNSLAGEIPAMIANSTSLRILSLYDNFLSGQLPRNLGKFSGLVVLDLSENQLSGPLPTEVCKGGKLLYFLVLDNQFSGEIPDHYAKCLTLLRFRVSNNHLEGTIPTGLFGLPHVSIIDLAYNNLSGSISETIGRSKNMSELFIQTNQISGLIPPTISRATNLVKIDFSNNLLSGPIPSEIGNLKRLNLLMLQGNKLNSSIPKSLSLLQSLNVLDLSNNLFTGSIPESLSALLPNSINFSNNLLSGSIPPSLTKGGLLESFSGNPGLCVLPVYANLLDQKFPVCSHTDDRKRLNVIWVAAIAVASIIIGFGAAWFLKRRPTKERAVMEQDDETLSSSFFSYDLKGFHRLTYDQQEIIEAMVDKNIVGYGGSGTVYKIELKSGELVAVKKLWSRTSKDSAQEGSLVWDKELRTEVGTLGSIRHKNIVKLYSYFSSFDCSFLVYEYMPNGNLWDALHKGWIHLTWPTRHQIALGIAQGLAYLHHDLLPPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTVIAGTYGYLAPEYAYTSRATTKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDSKEGVNEIIDKRLSGLFRDEIIQVIRIAIKCTYKAPANRPTMKEVVQQLIEADPCKFDSCKLSDKTK 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0776 946 Gene3D Phosphorylase Kinase; domain 1 635 735 - -
Dere04g0776 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Dere04g0776 946 Gene3D Ribonuclease Inhibitor 235 307 IPR032675 -
Dere04g0776 946 ProSitePatterns Protein kinases ATP-binding region signature. 657 680 IPR017441 GO:0005524
Dere04g0776 946 Gene3D Ribonuclease Inhibitor 178 234 IPR032675 -
Dere04g0776 946 Pfam Protein kinase domain 653 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0776 946 Gene3D Ribonuclease Inhibitor 308 567 IPR032675 -
Dere04g0776 946 FunFam leucine-rich repeat receptor-like protein kinase TDR 736 939 - -
Dere04g0776 946 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Dere04g0776 946 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Dere04g0776 946 SUPERFAMILY RNI-like 68 369 - -
Dere04g0776 946 SMART LRR_typ_2 211 235 IPR003591 -
Dere04g0776 946 SMART LRR_typ_2 90 114 IPR003591 -
Dere04g0776 946 SMART LRR_typ_2 161 187 IPR003591 -
Dere04g0776 946 SMART LRR_typ_2 403 427 IPR003591 -
Dere04g0776 946 SMART LRR_typ_2 259 283 IPR003591 -
Dere04g0776 946 SMART LRR_typ_2 331 355 IPR003591 -
Dere04g0776 946 SMART LRR_typ_2 475 498 IPR003591 -
Dere04g0776 946 SMART LRR_typ_2 499 523 IPR003591 -
Dere04g0776 946 FunFam Leucine-rich repeat receptor-like protein kinase 178 279 - -
Dere04g0776 946 Gene3D Transferase(Phosphotransferase) domain 1 736 939 - -
Dere04g0776 946 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 208 - -
Dere04g0776 946 Gene3D Ribonuclease Inhibitor 27 177 IPR032675 -
Dere04g0776 946 SMART serkin_6 651 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0776 946 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 177 - -
Dere04g0776 946 SUPERFAMILY L domain-like 293 542 - -
Dere04g0776 946 ProSiteProfiles Protein kinase domain profile. 651 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0776 946 SUPERFAMILY Protein kinase-like (PK-like) 643 928 IPR011009 -
Dere04g0776 946 FunFam receptor protein-tyrosine kinase CEPR1 634 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0776 Dere-ChrDere04 7886727 7889722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0776 23 933 Receptor kinase-like Gene Family AT5G49660 65.027 0.0 1214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere04g0776 Pkinase 1.3e-48 CL0016