Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0763 ATGTTACTCGACCGTTGTAATGTTCTTTATTGGGGCATTCCCGTTCTCCGCTCCTTCGAAGAATCCTCCCCTTCGGAACTCTGTGTCCTTCGCGCACTCATGGCGATTGCAACAGAGACACAATGTCAGGACAAGACTTCTTCAGAGGCTCCAGCCGTGGAGAAAAGAAGGTGGACTCTTAACGACTTTGACATTGGAAAGCCACTCGGAAGGGGAAAATTTGGCCACGTCTATTTGGCCAGAGAAAAGAGAAGTAATCATATAGTTGCTCTGAAAGTCCTCTTTAAGAGACAATTGCAACAGTCCCAAGTAGAGCATCAGCTCCAGCGAGAAGTTGAAATACAAAGTCATCTACGACATCCCAACATCTTACGCCTTTATGGATATTTTTATGATCAGAAACGAGTTTATCTGATTTTAGAGTATGCATCCAAAGGTGAATTATATAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACTTGCAGCTACTTATGTTGCATCATTGGCGCGAGCACTCGTATATTGCCATGGAAAGCATGTAATACATAGGGATATTAAACCAGAGAACCTTCTTACAGGTGCAAAGGGTGAGCTGAAGATAGCAGACTTCGGGTGGTCCGTCCACACATTCAATCGCAGGCGGACTATGTGTGGTACACTGGATTACCTCCCTCCTGAGATGGTGGAGAGTGTAGAGCATGATGCAAGTGTGGATATATGGAGCCTTGGTGTCCTGTGCTACGAGTTTCTTTATGGAATACCTCCTTTTGAGGCTAGAGAACATTCCGATACATATAGAAGGATTATACGAGTGGATCTCAAGTTCCCTCCTAGACCAATTGTCTCCGCCGCTGCAAAGGACCTCATCAGTCAGATGCTGGTCAAGGAATCCTCTCAACGTCTACCATTACTGAAACTTCTTGAACATCCTTGGATTGTTCAGAATGCTGAGCCCTCTGGTGTATATAAGGCCTAG 981 0.4455 MLLDRCNVLYWGIPVLRSFEESSPSELCVLRALMAIATETQCQDKTSSEAPAVEKRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKRQLQQSQVEHQLQREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYASKGELYKELQKCKYFSERLAATYVASLARALVYCHGKHVIHRDIKPENLLTGAKGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGIPPFEAREHSDTYRRIIRVDLKFPPRPIVSAAAKDLISQMLVKESSQRLPLLKLLEHPWIVQNAEPSGVYKA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0763 326 SMART serkin_6 63 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0763 326 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 44 324 IPR030616 GO:0004672
Dere04g0763 326 FunFam serine/threonine-protein kinase Aurora-1 147 322 - -
Dere04g0763 326 SUPERFAMILY Protein kinase-like (PK-like) 50 318 IPR011009 -
Dere04g0763 326 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Dere04g0763 326 Gene3D Transferase(Phosphotransferase) domain 1 147 323 - -
Dere04g0763 326 ProSiteProfiles Protein kinase domain profile. 63 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0763 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Dere04g0763 326 Gene3D Phosphorylase Kinase; domain 1 50 146 - -
Dere04g0763 326 FunFam Aurora kinase A 55 146 - -
Dere04g0763 326 Pfam Protein kinase domain 65 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0763 326 CDD STKc_Aurora 62 315 - -
Dere04g0763 326 PIRSF ILK 29 311 - -
Dere04g0763 326 Coils Coil 321 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0763 Dere-ChrDere04 7746114 7748785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0763 54 325 CBL-interacting serine-threonine protein kinases AT5G10930 35.842 3.97e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Dere04g0763 Pkinase 8.1e-71 CL0016