Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0758 ATGTTTTCCCGCCAAAATTCTCTACCGCAGCAGCGAATTGGATCCTCTCAAATGTCCAAAATACCATTAACCTTCAGTGTACATTTCTTCCTCTTGCTCGGCGTCTCAGTGATCTCCCGAGTAAATTCGCAAACCATAGGCTCCGAACAAGCCATCCTACTCGAAGTTAAACACCAACTAGGAGATCCACCGTTGCTTCGATCGTGGAACTCGTCATCCTCACTATGCGTTTGGCCGGAGATACGCTGTGCCGGTGGCGTCGTTACCCAGGTCCTCCTTTCAGGAAAAAGTATCACCCAGAAGCTCCCGGCGACGATCTGCGACCTCAAGAATCTGACTATGCTCGACCTCTCAAACAATGACATCCCCGGAGAATTCCCAAGATTGTTGTACAATTGCTCCAACCTCCAGTTCCTTGACCTCTCTGAAAACTACTTCACCGGTCCAATCCCCGACGACATTGACAGACTCAAAACTCTGACGTACTTAAGCCTTGCCGCCAACAATTTCTCCGGCGATGTCCCGGCCGCAATCGGGAGACTCTCAGAGTTACGAACGCTGTACCTCTACAATAACGAGTTTAACGGCACATTTCCCAAGGAAATCGGGTCCTTATCCAAACTCGAAGCCCTCGGTTTGGCCTATAATGACAAGTTTGTGCCCATGGCAGTCCCATCGGAGTTTGGGAACTTGAGGAATTTGACGTTCATCTGGATGACACAGTGCAATTTAATCGGAGAGATCCCTAAAAGTTTTGCCAACCTTAAGCGTCTCGTGCAATTGGATTTGTCACTGAATAGTTTGACAGGTAGCATCCCCAGCAGTTTGTTCTCGCTCAAGAATTCACAATTTTTGTACCTGTACCGCAATAGATTGTCTGGCGAAATACCTAGTTCGATCCAGGCCTTGAATTTGGTTCACGTTGATTTGGCAATGAACAACTTAACAGGTCCGATTCCTGAAGATTTTGGAAAGTTAGAGAATCTGACGGTACTTAATCTGTATATGAATCAACTTTCTGGTCAGATTCCAAGGAGCTTAGGCCTAATCAAAACGCTGAAGTACTTGAAGGTTTTTAGTAATAAGTTGAATGGAACTCTGCCTCCAGAATTAGGCCTACACTCATATCTTGAAGTGTTTGAAGTTGCAGACAATCAACTGAGCGGTGGGCTGCCTCAACATTTATGTGCGAATAATGCCTTGCAAGGTGTGATTGCTTTTTCTAACAATCTTAGTGGAGAATTGCCAGAATCGCTTGGAAATTGCACTACTCTGCGCACAGTTCAGCTCTTCAGTAACAATTTCTCTGGTAAGGTTCCACTGAGTCTTTGGACTTCCAGGAATTTGTCAACCTTGATGTTAAGCGAAAACTCGTTTTCTGGCCAACTTCCAAGTAAACTACCATGGAATCTGTCGAGATTGGAGATCAGAAACAATAACTTTTCGGGGGAGATATCTCTTGGGATTGTCTCCGCTGTAAATCTAGTAGTTTTTGATGCAAGAAACAATATGCTTTCGGGTGAAATTCCAAGGGAATTGACGGCTCTTTCTCGGCTTAATACTCTCATGCTTGACAGTAATCAACTTTCCGGAGAACTTCCATCGGAGATAGCCTCCTGGCAATCCCTGAATACTTTAACTCTCTCAAGAAACAAGCTTTATGGGCAAATTCCGGTAGCGATTGGCAATCTCCCTAACCTTGTTTACTTGGACTTGTCAAAAAATGACATCTCTGGTGAAATCCCATCTCAGCTTGGCAATTTAAGGCTGATTTTTCTCAACTTGTCCTCGAACAACCTTTCAGGGAACATCCCAAATGAGTTCAATAACCTTGCATACGACACCAGTTTCTTGGACAATCCTAATCTATGTGCTCATAGTCCAAATCTCAACCTCTCAAGATGCTTGACTAAAACTCCACAATACCCAAACAAATCGTCTTTCAAGTTCCTTGCCTTGATTCTTGTTCTCTCCGTCATTGCCTTGCTAGCCATTGCCACATTGGCCTTCTGTAAGTTCAAAGACATCCGGGTCAAGAAGAATTGTGGGCGTAACCTTTCAACATGGAGGCTGACATCATTCCAGAGGCTAGATTTCACAGAATGGAATCTCTTCTCAAACTTGACAGATGGTAACCTCATTGGAAGTGGAGGCTTTGGGAAAGTTTACCGGATTGCCTCCAATCGTCCCGGTGAGTATGTTGCCGTAAAAAGGATTTGGAGTGACAAAAAGTTGGATAATAAGCTGGAGAAAGAGTTCATGTCTGAAGTTGAAATCCTAGGCACGATTCGGCATTCCAATATCGTGAAGCTGCTGTGCTGCATTTCAAGTGAAAATTCAAAACTCCTTGTGTATGAATACAAGGAAAATAAGAGCCTGGATAAATGGCTTCGTCGAAAGAAAAAAGCATCGGCTACTCCACTCGGCAATCATCTAATCTTGAAGTGGCCAACCAGGTTGAAGATTGCCATTGGAGCTGCACAAGGACTGTGTTACATGCACCACGAATGCTCCCCACCAATCATCCATAGAGATGTGAAGTGTAGCAACATATTACTGGACCTCGAATTTAGGGCGTGTATTGCAGATTTTGGGTTAGCCAGGATGTTAGCAAAGTCTGGGGAGCCACATAGTTTGTCTGCTATAGCAGGGTCTTTCGGGTACATCCCCCCAGAATACGCCTATTCAACTAGGATCAACGAGAAAGTGGATGTGTATAGTTTTGGGGTTGTACTCCTGGAGCTTGTAACAGGAAAAGAACCTTATAGCGTAAAGGAGCATATAAGCCTAGTAGATTGGGCAAGGCAGTATCACAGTGAAGGAAAATGCCTTGCGGATGCTTTGGATGAAGAAATCAAAGAAGCATGTCATGTGGAGGAGATGACAAACGTCTTTAAATTAGGCCTTATTTGCACAAGCACATTACCCTCAGCTAGACCTTCCATGAAAGAGATTTTGCAGGTTCTTCGTAAGTGTTGTCCGCCAAGTTACGGAGGTAAAAAAGTGGGAACTGAGTTTGATATTACTCCCCTTCTTAGCGATACCATGTACATTTCTAATTACAAGGATGGTAGCAAGGCTATGGGCGAGAGTGATGAAAGCTGCCTGTGA 3111 0.4433 MFSRQNSLPQQRIGSSQMSKIPLTFSVHFFLLLGVSVISRVNSQTIGSEQAILLEVKHQLGDPPLLRSWNSSSSLCVWPEIRCAGGVVTQVLLSGKSITQKLPATICDLKNLTMLDLSNNDIPGEFPRLLYNCSNLQFLDLSENYFTGPIPDDIDRLKTLTYLSLAANNFSGDVPAAIGRLSELRTLYLYNNEFNGTFPKEIGSLSKLEALGLAYNDKFVPMAVPSEFGNLRNLTFIWMTQCNLIGEIPKSFANLKRLVQLDLSLNSLTGSIPSSLFSLKNSQFLYLYRNRLSGEIPSSIQALNLVHVDLAMNNLTGPIPEDFGKLENLTVLNLYMNQLSGQIPRSLGLIKTLKYLKVFSNKLNGTLPPELGLHSYLEVFEVADNQLSGGLPQHLCANNALQGVIAFSNNLSGELPESLGNCTTLRTVQLFSNNFSGKVPLSLWTSRNLSTLMLSENSFSGQLPSKLPWNLSRLEIRNNNFSGEISLGIVSAVNLVVFDARNNMLSGEIPRELTALSRLNTLMLDSNQLSGELPSEIASWQSLNTLTLSRNKLYGQIPVAIGNLPNLVYLDLSKNDISGEIPSQLGNLRLIFLNLSSNNLSGNIPNEFNNLAYDTSFLDNPNLCAHSPNLNLSRCLTKTPQYPNKSSFKFLALILVLSVIALLAIATLAFCKFKDIRVKKNCGRNLSTWRLTSFQRLDFTEWNLFSNLTDGNLIGSGGFGKVYRIASNRPGEYVAVKRIWSDKKLDNKLEKEFMSEVEILGTIRHSNIVKLLCCISSENSKLLVYEYKENKSLDKWLRRKKKASATPLGNHLILKWPTRLKIAIGAAQGLCYMHHECSPPIIHRDVKCSNILLDLEFRACIADFGLARMLAKSGEPHSLSAIAGSFGYIPPEYAYSTRINEKVDVYSFGVVLLELVTGKEPYSVKEHISLVDWARQYHSEGKCLADALDEEIKEACHVEEMTNVFKLGLICTSTLPSARPSMKEILQVLRKCCPPSYGGKKVGTEFDITPLLSDTMYISNYKDGSKAMGESDESCL 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0758 1036 Gene3D Phosphorylase Kinase; domain 1 691 787 - -
Dere04g0758 1036 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 279 990 - -
Dere04g0758 1036 SMART serkin_6 708 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0758 1036 FunFam Receptor-like protein kinase HSL1 isoform A 47 196 - -
Dere04g0758 1036 Gene3D Ribonuclease Inhibitor 469 654 IPR032675 -
Dere04g0758 1036 SUPERFAMILY Protein kinase-like (PK-like) 699 989 IPR011009 -
Dere04g0758 1036 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Dere04g0758 1036 Pfam Leucine rich repeat 517 577 IPR001611 GO:0005515
Dere04g0758 1036 Pfam Leucine rich repeat 159 217 IPR001611 GO:0005515
Dere04g0758 1036 Gene3D Ribonuclease Inhibitor 307 398 IPR032675 -
Dere04g0758 1036 Pfam Protein kinase domain 710 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0758 1036 Gene3D Ribonuclease Inhibitor 399 468 IPR032675 -
Dere04g0758 1036 ProSiteProfiles Protein kinase domain profile. 708 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0758 1036 FunFam Kinase family with leucine-rich repeat domain-containing protein 788 1005 - -
Dere04g0758 1036 SUPERFAMILY RNI-like 115 610 - -
Dere04g0758 1036 Gene3D Ribonuclease Inhibitor 222 306 IPR032675 -
Dere04g0758 1036 Gene3D Ribonuclease Inhibitor 46 221 IPR032675 -
Dere04g0758 1036 Gene3D Transferase(Phosphotransferase) domain 1 789 996 - -
Dere04g0758 1036 FunFam Receptor-like protein kinase HSL1 688 787 - -
Dere04g0758 1036 FunFam Leucine-rich repeat receptor-like protein kinase TDR 323 637 - -
Dere04g0758 1036 SMART LRR_typ_2 255 279 IPR003591 -
Dere04g0758 1036 SMART LRR_typ_2 516 540 IPR003591 -
Dere04g0758 1036 SMART LRR_typ_2 109 133 IPR003591 -
Dere04g0758 1036 SMART LRR_typ_2 181 205 IPR003591 -
Dere04g0758 1036 SMART LRR_typ_2 564 588 IPR003591 -
Dere04g0758 1036 SMART LRR_typ_2 326 350 IPR003591 -
Dere04g0758 1036 Pfam Leucine rich repeat N-terminal domain 49 83 IPR013210 -
Dere04g0758 1036 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 199 296 - -
Dere04g0758 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0758 Dere-ChrDere04 7710095 7713293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0758 35 1012 Receptor kinase-like Gene Family AT5G25930 55.849 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere04g0758 Pkinase 9.6e-46 CL0016