Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0752 ATGCCTGAACTGCGTAGCAGAGCACGCAGAAACCGGCCATTTGGTAACTCCAACCCGACTCCGATTACACAGCCCGATAAGCCCACGTTAAGAACTCGGCAGAGGAGAAGAACCACCGCGCAGAATACGAGAAATAGGAACCAGACGAACGCGATCGCAGCTGATGAAGCAAATAACATTGTGAATAAGGATGTCGGTGCCGTTCCTCTGACCAGGACATTGAAAGGCAAGGAAGGAGTACAAGCGCCAGACGCACCGGTTAGGGTTTTGAAACGGGAAGTAGGGGAAAAAGCCATGGATGAGTACGACAGCGGTGGCCGAAGCCCCGATAAGGCTGCAGGGGCCGAAGATGAGGGCAGCACAGCTCCCCTTCCTGAGAAGGTCCAGGTTGGTGGTTCCCCACTATACAGAATCGATAGAAAATTAGGGAAGGGAGGATTTGGACAAGTCTACGTTGGCAGGCGTGTAGGAGCTACAAACTGTAATGAACGAACTGGGGCTGGAGCTGTTGAAGTCGCCTTAAAGTTCGAGCATAGAAGCAGCAAAGGGTGTAATTATGGTCCGCCATATGAGTGGCAGGTTTACAATGCATTAGGTGGTAGTCATGGGGTTCCACGAGTTCATTACAAGGGGCGTCAAGGTGACTACTATGTCATGGTCATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATAACAACTCTCACACAATGTCTACAGAAATGGTGGCATGCATTGCAATTGAGGCTATTTCCATATTAGAGAAGATGCATTCCAGAGGATATGTGCATGGTGATGTAAAACCTGAGAATTTTCTGCTTGGCCCCCCTGGAACTCCTGATGAGAAAAAGCTATTTCTGGTTGATCTCGGATTAGCAAGCCGGTGGCGTGATAGTTCAACTGGCCTTCATGTTGAGTATGATCAGCGGCCAGATGTATTCAGAGGGACAGTACGTTATGCTAGCGTGCATGCTCATCTAGGTAGAACAGGTAGTAGGAGGGATGACTTGGAATCTCTTGCTTACACGCTCATCTTCCTTCTTCGTGGTCGATTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCTCCTGAAACTTTGTGTTGCTTTTGTCCTCAACCCTTCCGGCAGTTTGTTGAGTATGTGGTAAATTTGAAGTTTGACGAGGAACCTAATTATGCGAAGTATATATCCCTTTTTGATGGTATTGTTGGTCCGAATCCAGACATCAGGCCAATAAATACTGATGTTGCTCAGAAGCTTATATGTCAGGTTGGGCTTAAGAGAGGGCGACTGACCATTGAAGATGATGATGATGAGCAGCCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACCCAATGGATTAGTGTTTATAATGCTCGGCGACCAATGAAGCAAAGGTATCATTACAATGTTGCTGATGTGCGGCTGTCCCAACACATTGAGAAAGGAAATGAGGATGGGTTGTTTATCAGTAGTGTGGCTTCTTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCACCTTACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTACTACATCAGTGCCATAGCAGGAGCTAATAATGGTAGCTCATTGGTTGTAATGTCCAAAGGGACCCAGTATTTACAGCAGTCGTACAAAGTCAGTGATTCATTTCCCTTCAAGTGGATCAATAAAAAATGGAGAGAAGGGTTTTACGTAACTGCCATGGCCACTGCTGGAAGTAGATGGGCAATTATTATGTCCCGTGGAGCCGGATTTTCTGACCAGGTTGTGGAACTTGATTTCCTATATCCCAGTGAAGGTATTCATCGTAGATGGGATAGTGGATACCGTATCACATCAACTGCTGCAACTTGGGACCAAGCTGCTTTTGTTCTTAGTGTACCAAGAAGGAAACCAGCTGATGAAACTCAAGAGACACTTCGTACATCTGCTTTCCCTAGCACTCATGTTAAGGAAAAATGGGCCAAGAACCTGTATATTGCATCTATCTGTTATGGGAGAACAGTTTCATGA 2112 0.4593 MPELRSRARRNRPFGNSNPTPITQPDKPTLRTRQRRRTTAQNTRNRNQTNAIAADEANNIVNKDVGAVPLTRTLKGKEGVQAPDAPVRVLKREVGEKAMDEYDSGGRSPDKAAGAEDEGSTAPLPEKVQVGGSPLYRIDRKLGKGGFGQVYVGRRVGATNCNERTGAGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLASRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDVAQKLICQVGLKRGRLTIEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIIMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0752 703 MobiDBLite consensus disorder prediction 93 114 - -
Dere04g0752 703 MobiDBLite consensus disorder prediction 41 55 - -
Dere04g0752 703 FunFam casein kinase 1-like protein HD16 109 459 - -
Dere04g0752 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Dere04g0752 703 ProSitePatterns Protein kinases ATP-binding region signature. 142 175 IPR017441 GO:0005524
Dere04g0752 703 Gene3D Transferase(Phosphotransferase) domain 1 108 431 - -
Dere04g0752 703 ProSiteProfiles Protein kinase domain profile. 136 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0752 703 PANTHER CASEIN KINASE-RELATED 136 669 - -
Dere04g0752 703 CDD STKc_CK1 136 412 - -
Dere04g0752 703 SUPERFAMILY Protein kinase-like (PK-like) 136 418 IPR011009 -
Dere04g0752 703 MobiDBLite consensus disorder prediction 11 28 - -
Dere04g0752 703 Pfam Protein kinase domain 136 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0752 703 MobiDBLite consensus disorder prediction 93 130 - -
Dere04g0752 703 SMART serkin_6 136 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0752 703 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0752 Dere-ChrDere04 7576121 7580898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0752 135 412 MAP Kinase Kinase Kinase AT5G50180 23.711 8.38e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dere04g0752 Pkinase 5.7e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0752 04 7576121 7580898 Dere05g2198 05 32113980 32118336 CCT
Dere04g0752 04 7576121 7580898 Dere04g0752 04 7576121 7580898 ECH