Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0747 ATGGCCAAAGGAGCTCTTCAAACGTTTCCAAAGTCCCTCAAGTTTATGTGCCTCGTCATGCTGGTGCTCAACCTTGGCTCCTCACCATCACATGGGAATCAAGAACGAGAACTTGAGTTTCTGCTATCCTTCAAAGCCTCTATCAACGACCCGGGTCAGTCTCTCTCCAGCTGGCTCAATTCTTCAGCCACTATCTGTAACTGGTATGGCCTGACCTGCGACCACAACTCTCACGTTAACGCCATCGAACTCCCTGGAAAAAACATGTCCGGCACGATTTCCTCGTCCATATTTCAACTCCCCAACGTTACAAATATCGACCTCTCCAACAATGAGTTCGCGGGGAGAATTGTTTTCCCGTTTTCTTCGTCTCTCTCATCACTTCGTTACCTCAATCTCAGCAACAACAACCTAACAGGTTCGTTGCCCGAGTTTTTATTTTCTGCGTCGTTTTCCCACCTAGACTACCTGGATCTTTCAAACAACATGTTTTCGGGGTCAATTCCACATCAAGTTGGGTTACTTTCTAGCCTAAAATATCTTGATGTTGGAGGAAACGTTTTGGTGGGAGAAATTCCTAATTCCATTACCGACATCACAAGTTTACAATACTTGACATTGGCTTCGAACCAGCTAGTGGGTGAAATCCCACGTGACATAGGTGTAATGAAGAGCCTGAAGTGGATTTACTTGGGGTATAACAACCTCTCCGGTGAGATTCCAAAGAGCATTGGAGAATTAGCGTCTTTGTATCATCTGGACCTCGTTTATAACAATCTCACAGGATTGATTCCCGAGGCTCTCGGGAACCTCATTAATCTTGAGTTTCTCTTCCTCTACAAAAACAACCTTACGGGTCCAATTCCCTCGTCCATTTTCTACTTGAAAAAGCTTGTGTCGCTTGATCTCAGCGATAACTCTCTTTTGGGTGAGATTCCAGAGCTCGTGATTAATCTGCAGAGACTAGAGGTTCTTCAGCTTTTCTCAAACAACTTTACCGGAAAGATTCCGAGGGCTTTAACAACTTTGCCTCGGCTTCAAGTTCTTCAGCTGTGGTCCAACAGATTAACGGGTGAGATTCCAAAAGAGCTGGGGAAGCATAACAATCTCACTGTTCTAGACCTTTCCACCAACAACCTCTCCGGGGAGATTCCACAAGGCTTATGCGACTCACGCAGTCTTTTCAAGCTTATCCTCTTCTCTAACTCTCTCGAAGGACAAATCCCGTACAGCTTAAGCTCTTGCACAAGCCTAGGCCGGGTACGTCTCCAGAACAACAAGCTGTCGGGGGAATTACCATCGGAATTCACCAAGCTGCCCCACGTATACTTATTGGACATGTCTGGCAATAAACTTTCTGGGAGGATCGATGACAAGAAGTGGGACATGCCGGCGCTTCAATCGCTGAATTTGGCTAAAAACAATTTCTCCGGAGAGTTACCAAACTCTTTTGGGAGTAGCAAACTGGAGAGCCTTGACTTATCCGAGAATCAGTTTTCTGGTTATATTCCACCTGGTCTGGGAAGCTTATCGGAGCTCATGCAACTAAAGCTGAGCAATAACAGGCTATCCGGTAATATCCCAAATGAACTTTGTTCATGCAAGAAGCTTGTAGCTTTAGACCTCAGTCACAATCAACTTAGAGGGCAACTACCCAAAAGTCTTGGGGAGATGCCGGTTCTAGGGATGCTTGATCTGTCTGGAAACCAATTGTGGGGTGAGATTCCCGAAAATTTAGGAACCGTGGAATCTCTGGTAGAGGTAAACATATCCTACAACCATTTTCATGGGAGGTTACCGTCCACCGGACCTTTCTTTGCCATCAATGCCAGCGACGTCATCGGAAACGACCTTTGTGAGATTGACAGTGACAGTAGAAGCGGTTTGCCACCGTGCGGCAAAAGAGAAAATAACAGGAACCCAACTTGGTGGTTTTGTGTGTTAGGTCTAGCCGCGTTTGTGTTGGTAGTTTCCCTCATTGTCTTCATCCGTAGAAGAAAGAATTTGAAGGTGACCATCACGACGTTGGAAAATGAAGATGGCACGTGGGAAATGCACTATTTCGACCCCAAGGCTTCGAAACTCATCACTATCGGCGATGTGTTATCTTCGGCAAAAGAAGGAAATATGATCTCCAAAGGAGAAAAAGAGATCATGCAATTCGAAGTGAAAGAGATAAGTGACCTAAATTGCTTTTGGGAAGACATGGTGGAAATTGGTAAACTCCAGCACCCCAACGTCGTTAAGCTGACGGGAATATGTAGGTATGGTAAAGGAGGGTACCTGGTGTATGAGCATGCGGAGGGAAAATACTTAAGCGACGTCTTCAGGAGTCTAAGCTGGGACCGACGGCGAAATATTGCGCTTGGGATTGCACAAGCAATCAAATATTTGCACGCTCATGGTTCAACGTTTGCTTTGGTAGGTGATATGTCACCCGAGAGAGTTATAGTGGACGGAAAAGATGTCCCTCGTCTCAAGTTGTGCCCTCCGGGAACTATATGTACGGAACTCAAGGGTTCCATTTCTTCACCATACGTTGCACCAGAATCAAGAAATGGCAAGGAGGTGACAGAGAAGAGTGACATATACGGTTTCGGGGTTATTCTGATTGAGCTATTGACGGGAAGAAGTCCGGTGGACGCAGAAGTGGGTATGCAGGAGCACGAGAGCATCGTGGCGTGGGCCCGATATTGCTATTCGGACTGTCATCTGGATATGTGGGTCGACCCGATCGTGAAGGGCGGGCTTGCATCGACCACTCGGAACGACATCGTTGAGATCATGAACCTCGCCCTACACTGCACAGCCACGGATCCCTCAGCTAGGCCATGTGCAAGCCACGTGTTCAAAACCCTACGCGCCGTTACCACTTCCACTTTTCCCTGTGTTTCCTGA 2898 0.4679 MAKGALQTFPKSLKFMCLVMLVLNLGSSPSHGNQERELEFLLSFKASINDPGQSLSSWLNSSATICNWYGLTCDHNSHVNAIELPGKNMSGTISSSIFQLPNVTNIDLSNNEFAGRIVFPFSSSLSSLRYLNLSNNNLTGSLPEFLFSASFSHLDYLDLSNNMFSGSIPHQVGLLSSLKYLDVGGNVLVGEIPNSITDITSLQYLTLASNQLVGEIPRDIGVMKSLKWIYLGYNNLSGEIPKSIGELASLYHLDLVYNNLTGLIPEALGNLINLEFLFLYKNNLTGPIPSSIFYLKKLVSLDLSDNSLLGEIPELVINLQRLEVLQLFSNNFTGKIPRALTTLPRLQVLQLWSNRLTGEIPKELGKHNNLTVLDLSTNNLSGEIPQGLCDSRSLFKLILFSNSLEGQIPYSLSSCTSLGRVRLQNNKLSGELPSEFTKLPHVYLLDMSGNKLSGRIDDKKWDMPALQSLNLAKNNFSGELPNSFGSSKLESLDLSENQFSGYIPPGLGSLSELMQLKLSNNRLSGNIPNELCSCKKLVALDLSHNQLRGQLPKSLGEMPVLGMLDLSGNQLWGEIPENLGTVESLVEVNISYNHFHGRLPSTGPFFAINASDVIGNDLCEIDSDSRSGLPPCGKRENNRNPTWWFCVLGLAAFVLVVSLIVFIRRRKNLKVTITTLENEDGTWEMHYFDPKASKLITIGDVLSSAKEGNMISKGEKEIMQFEVKEISDLNCFWEDMVEIGKLQHPNVVKLTGICRYGKGGYLVYEHAEGKYLSDVFRSLSWDRRRNIALGIAQAIKYLHAHGSTFALVGDMSPERVIVDGKDVPRLKLCPPGTICTELKGSISSPYVAPESRNGKEVTEKSDIYGFGVILIELLTGRSPVDAEVGMQEHESIVAWARYCYSDCHLDMWVDPIVKGGLASTTRNDIVEIMNLALHCTATDPSARPCASHVFKTLRAVTTSTFPCVS 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0747 965 Gene3D Ribonuclease Inhibitor 36 190 IPR032675 -
Dere04g0747 965 PANTHER OS04G0122200 PROTEIN 382 947 - -
Dere04g0747 965 Pfam Leucine rich repeat 344 404 IPR001611 GO:0005515
Dere04g0747 965 Pfam Leucine rich repeat 488 547 IPR001611 GO:0005515
Dere04g0747 965 Pfam Leucine rich repeat 152 212 IPR001611 GO:0005515
Dere04g0747 965 Pfam Leucine rich repeat 249 308 IPR001611 GO:0005515
Dere04g0747 965 Pfam Leucine Rich Repeat 466 485 IPR001611 GO:0005515
Dere04g0747 965 SMART LRR_typ_2 369 391 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 151 175 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 247 270 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 199 223 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 558 582 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 463 486 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 125 149 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 343 367 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 510 534 IPR003591 -
Dere04g0747 965 SMART LRR_typ_2 271 295 IPR003591 -
Dere04g0747 965 FunFam Leucine-rich receptor-like protein kinase family protein 221 314 - -
Dere04g0747 965 Gene3D Transferase(Phosphotransferase) domain 1 769 961 - -
Dere04g0747 965 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Dere04g0747 965 SUPERFAMILY L domain-like 313 612 - -
Dere04g0747 965 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Dere04g0747 965 SUPERFAMILY L domain-like 36 361 - -
Dere04g0747 965 SUPERFAMILY Protein kinase-like (PK-like) 728 957 IPR011009 -
Dere04g0747 965 FunFam LRR receptor-like serine/threonine-protein kinase 151 220 - -
Dere04g0747 965 FunFam Leucine-rich repeat receptor-like kinase 36 150 - -
Dere04g0747 965 Pfam Protein kinase domain 732 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0747 965 Gene3D Ribonuclease Inhibitor 295 626 IPR032675 -
Dere04g0747 965 ProSiteProfiles Protein kinase domain profile. 642 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere04g0747 965 Pfam Leucine Rich repeat 126 140 IPR001611 GO:0005515
Dere04g0747 965 Gene3D Ribonuclease Inhibitor 191 292 IPR032675 -
Dere04g0747 965 Gene3D Phosphorylase Kinase; domain 1 707 766 - -
Dere04g0747 965 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 325 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0747 Dere-ChrDere04 7541393 7544372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0747 15 954 Receptor kinase-like Gene Family AT2G25790 50.892 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Dere04g0747 Pkinase 5e-20 CL0016