Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0745 ATGAGTGAAACACTTTACAGTGCACGCGTCGGGAGTGTGAGTGTGGGTGGCGTTTCTCCTACTCCATTAGAAATAGGCGTGGTGAAAGAAAGCACCACAGGGATGATGGTGGTGAGTTCGGGGTGCAAAGAGGGAAGCAAGGTGGGAATGGAGAACGGAAAGTATGTGCGGTACACACCGGAGCAGGTGGAAGCACTGGAGAGGCTTTATCTCGAGTGCCCGAAGCCCAGTTCCATGCGTCGCCAGCAGCTCATCAGAGAATGCCCCATTCTCTCCAATATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGCGGAAAGAGTCGTCACGCCTGCAAGCTGTGAACAGGAAGCTGACGGCGATGAATAAACTACTGATGGAGGAAAATGAGAGATTGCAGAAGCAAGTGTCACAGCTGGTTTATGAGAATAGCTTTTTCCGCCAACAGACTCACAATGGCACCGTTGCTACGACGGACACAAGTTGTGAGTCGGTGGTAACGAGCGGTCAGCACCATGTGACACCTCAGCATCCACCAAGGGATGCCAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACCTTAGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCTGTGGAGTGGGTCCAAATGCCCGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTAGCTATTTCCCATGATTGCCGTGGAGTGGCAGCACGAGCGTGTGGCCTTGTCGGTCTGGAACCCACAAGGGTTGTTGAAATCCTCAAAGATAGGCCGTCATGGTCTCGTGATTGCCGAGCGTTGGACGTTCTGAATGTGATGCCCACTGGAAATGGGGGAACCATTGAAATGCTTTACATGCAGTTGTATGCGCCAACAACTTTGGCACCTGCTCGTGACTTTTGGTTGCTGCGCTACACATCTCTTATGGAGGACGGTAGTCTAGTGGTCTGTGAAAGATCACTCAACAACACTCAGAATGGACCTACAGTGCCCCCCGTGCAGCATTTTGTTAGAGCAGACATGCTGCCTAGCGGCTATCTGATAAGACCTTGTGAAGGAGGTGGATCCATTATTCATATCGTCGATCATATGGATTTAGAGCCTTGGAGTGTGCCTGAAGTCTTGCGCCCACTTTATGAGTCATCAACACTGCATGCTCAAAAGACAACTATGGCGGCTTTACGGCATTTGAGGCAGATCTCTCAAGAAGTTTCTCAGCCAAATGTCTCAGGATGGGGAAGAAGGCCTGCAGCTTTACGTGCACTTAGTCAGCGGTTGAGCAAGGGATTCAATGAAGCCGTAAATGGGTTTGCAGATGATGGCTGGTCCATGTTAGAAAGTGACGGCATTGATGATGTCACCCTTCTGGTGAACTCATCTCCTAACAAGATCATGGGATTAAATCTTGGTCATAGCAGTGGATTTCCTTCTATGAGCAGTTCTATGCTATGTGCCAAAGCATCGATGTTGCTACAGAATGTGCCTCCAGCAATTCTTCTGAGATTCTTGAGGGAGCACCGATCAGAGTGGGCAGATAGTAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCTGTAGTTTGCCAGGGGCCCGGGCAGGAGGTTTTGGGGCTCAGGTTATTCTTCCTTTGGCTCACACAATTGAGCATGAAGAGTTTATGGAGGTGATTAGGCTTGAAAACATGGGTTGCTTTAGGGATGACATGACTATACCTGGGGATATTTTCCTCTTGCAACTCTGTAGTGGAGCGGATGAGCATGCAGTTGGTACCTCAGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCACTGATGATGCACCCATTTTACCTTCTGGTTTTCGCATCATACCTGTTGATTCTAACATGGATGCTGTAAGTCCGAACCGTACACTTGATCTTGCTTCTGCTCTCGAAGTTAAAACCACATCAAACAAAGCTGGCAGTGACGGTAATGGTAGTTTGGGGAACAGAAAATCTGTGATGACAATAGCATTCCAATTTGCATTTGAAGTCCACCTTCAGGATAGTGTAGCCTCTATGGCCCGGCAGTACGTCCGCAGTATTATTGCATCTGTTCAGAGAGTTGCATTAGCACTCTCCCCTTTGCATTTTGGTTCTCATAATGGTTTGTGTACACCACCCGGCACCCCTGAGGCACAGACACTTGCTCGGTGGATCTGTCAAAGCTATAGATGCTATCTAGGGGTCGAACTGCTAAAATGTGAAGGCAGTGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCCGTCATGTGCTGCTCTTTAAAGGCATTGCCCGTTTTCACATTTGCTAATCAAGCTGGACTTGACATGCTTGAGACAACCTTGGTTGCTCTTCAAGACATTACTCTGGAAAAAATCTTTGACGATAATGGAAAGAAAATCCTGTGCTCTGAGTTCCCTCATATAATGCAGCAGGGCTTTTTGTGTATGCAAGGTGGTATCTGTTTATCTAGCATGGGGAGGCCAGTGTCCTATGAGAGAGCAGTCGCATGGAAAGTGTCGAACGAAGAAGAAACGGCCCATTGCATATGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2622 0.4825 MSETLYSARVGSVSVGGVSPTPLEIGVVKESTTGMMVVSSGCKEGSKVGMENGKYVRYTPEQVEALERLYLECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVYENSFFRQQTHNGTVATTDTSCESVVTSGQHHVTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCRGVAARACGLVGLEPTRVVEILKDRPSWSRDCRALDVLNVMPTGNGGTIEMLYMQLYAPTTLAPARDFWLLRYTSLMEDGSLVVCERSLNNTQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEVSQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPNKIMGLNLGHSSGFPSMSSSMLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARAGGFGAQVILPLAHTIEHEEFMEVIRLENMGCFRDDMTIPGDIFLLQLCSGADEHAVGTSAELIFAPIDASFTDDAPILPSGFRIIPVDSNMDAVSPNRTLDLASALEVKTTSNKAGSDGNGSLGNRKSVMTIAFQFAFEVHLQDSVASMARQYVRSIIASVQRVALALSPLHFGSHNGLCTPPGTPEAQTLARWICQSYRCYLGVELLKCEGSESILKSLWHHSDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKILCSEFPHIMQQGFLCMQGGICLSSMGRPVSYERAVAWKVSNEEETAHCICFMFINWSFV 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0745 873 Gene3D - 46 120 - -
Dere04g0745 873 Pfam MEKHLA domain 732 872 IPR013978 -
Dere04g0745 873 Coils Coil 119 150 - -
Dere04g0745 873 FunFam Homeobox-leucine zipper protein REVOLUTA 54 109 - -
Dere04g0745 873 CDD START_ArGLABRA2_like 192 407 - -
Dere04g0745 873 CDD homeodomain 54 114 IPR001356 GO:0003677
Dere04g0745 873 SUPERFAMILY Bet v1-like 197 409 - -
Dere04g0745 873 CDD bZIP 106 145 - -
Dere04g0745 873 ProSiteProfiles 'Homeobox' domain profile. 49 113 IPR001356 GO:0003677
Dere04g0745 873 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 50 873 IPR044830 GO:0003700
Dere04g0745 873 ProSiteProfiles START domain profile. 188 402 IPR002913 GO:0008289
Dere04g0745 873 SMART START_1 197 407 IPR002913 GO:0008289
Dere04g0745 873 Pfam Homeodomain 54 112 IPR001356 GO:0003677
Dere04g0745 873 Gene3D - 231 412 IPR023393 -
Dere04g0745 873 SMART HOX_1 51 117 IPR001356 GO:0003677
Dere04g0745 873 Pfam START domain 198 406 IPR002913 GO:0008289
Dere04g0745 873 SUPERFAMILY Homeodomain-like 53 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0745 Dere-ChrDere04 7530035 7537418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0745 50 873 Homeobox Transcription Factor Family AT4G32880 80.000 0.0 1381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere04g0745 START 1.2e-52 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0745 04 7530035 7537418 Dere04g0745 04 7530035 7537418 ECH