Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0743 ATGGAAGTACCCCACTATTTGCATACCCCGCATCACTCCACCTCCACCTCCACTTCCGATCATAATATGGCCAACGCTGATTCTTTCGTCGTCGAGGACCTCCTTGACTTCCCAAACGACGACGAACCTCTCCTCACCGACGACGCTACCATCCACTCCCTTCCCGGCAACTCTACCGATTCTTCCACCGTCAACGCCGCCGTCGAAAGCTGCAATTCCTCTTCTTTCTCAGGGGGAGACCCTAATTTCCTGGGCGATATTGGCTGCCGCAACTTTCACGACCTTCATTTGCCCACTGACCTCTGCGTCCCCGTACCGTATGATGACATGGCGGAGCTGGAATGGCTTTCGAATGTGGTGGAGGAATCATTCTCGAGCGAGGACCTGCAGAAGATGCAGCTGATATCGGGGATGAAAGCCCGAAACGACGTCGAATCATCTGAAACCCATGAATTATTCCAGGGCGAAACGAACCGAAGCGTGAACAACCCCATATTCAACTCGGAAGTCTCCGTTCCAGCCAAGGCTCGCAGCAAGCGCTCACGCGGACCCCCATGCAACTGGGCCTCTCGCCTCCTCCTCCTTTCTGCATCTCCATCACCGTCTCCGTCCCCAACGTCATCTTCCTCCGAGCCTGACGTCATCCTCCCCACCGGAAAGAAACCGGGAAAGGCGGCGCCCAGGAAGAAGGACAGCGGCGCCGAGGGGCGCAAGTGCCTGCATTGTGCAACAGATAAGACGCCGCAATGGCGGACGGGGCCCTTGGGCCCGAAAACGCTCTGCAATGCATGCGGAGTGAGGTACAAGTCGGGCCGGCTGGTGCCGGAGTACAGGCCGGCGGCGAGCCCGACGTTCGTGCTGACGAAGCACTCGAACTCGCACCGGAAGGTGATGGAGCTCCGACGCCAGAAAGAGATGCAGCAGCAGCAGCAACACCTTCAGTTTCTGCAACATCCCAACATGATGTTTGAGTTCCATCATGCATCCAACGGGGACGATTTCTTGATCCATCAACACGTGGGCCCTGACTTCAGGCAGCTGATTTAG 1047 0.5712 MEVPHYLHTPHHSTSTSTSDHNMANADSFVVEDLLDFPNDDEPLLTDDATIHSLPGNSTDSSTVNAAVESCNSSSFSGGDPNFLGDIGCRNFHDLHLPTDLCVPVPYDDMAELEWLSNVVEESFSSEDLQKMQLISGMKARNDVESSETHELFQGETNRSVNNPIFNSEVSVPAKARSKRSRGPPCNWASRLLLLSASPSPSPSPTSSSSEPDVILPTGKKPGKAAPRKKDSGAEGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMQQQQQHLQFLQHPNMMFEFHHASNGDDFLIHQHVGPDFRQLI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0743 348 PANTHER GATA TRANSCRIPTION FACTOR 14 311 - -
Dere04g0743 348 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 235 297 - -
Dere04g0743 348 MobiDBLite consensus disorder prediction 1 22 - -
Dere04g0743 348 Pfam GATA zinc finger 239 272 IPR000679 GO:0006355|GO:0043565
Dere04g0743 348 FunFam GATA transcription factor 229 314 - -
Dere04g0743 348 MobiDBLite consensus disorder prediction 197 214 - -
Dere04g0743 348 ProSitePatterns GATA-type zinc finger domain. 239 264 IPR000679 GO:0006355|GO:0043565
Dere04g0743 348 MobiDBLite consensus disorder prediction 197 236 - -
Dere04g0743 348 SMART GATA_3 233 283 IPR000679 GO:0006355|GO:0043565
Dere04g0743 348 Gene3D - 234 314 IPR013088 GO:0006355|GO:0008270
Dere04g0743 348 ProSiteProfiles GATA-type zinc finger domain profile. 233 269 IPR000679 GO:0006355|GO:0043565
Dere04g0743 348 CDD ZnF_GATA 238 285 IPR000679 GO:0006355|GO:0043565
Dere04g0743 348 PIRSF Txn_fac_GATA_plant 12 329 IPR016679 GO:0003677|GO:0005634|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0743 Dere-ChrDere04 7491873 7493412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0743 21 348 C2C2-Gata Transcription Factor Family AT5G25830 50.286 5.07e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dere04g0743 GATA 1.8e-15 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0743 04 7491873 7493412 Dere04g0743 04 7491873 7493412 ECH