Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0726 ATGAGCAAGCGTTTGCTAGTGTTGATTATAGTTCTTTCTTTCTTCATCAATGTCCAATCCCAAGAAACTGGAGAGAACGTGCCAGAGATGCCTGAAACTATCCACCCTAGTAAAGGGGTTGTTATAGCTGTCCTCACCGTTATGTTTGCCATATCATTTTTCCTACTTGCCTATGTAAAGTTCTGCAGAAACAGCCCTCTTCAAGTTCTGAACCGAGATATAAGCATTCAAGGACTAACAGGATCAGGGTCTAGATATTCCGGAATAGACAAACAAGTAATCGAAGCACTGCCGTTTTTCAAGTTCTCTTCAGTCAAGGGGTCGAAACAAGGCCTAGAATGTGCTGTTTGCCTGTCCAAGTTTGAAGACACTGAGGTTCTCAGGTTGCTGCCAAAGTGCAAGCATGCTTTCCACATGAATTGCATCGATAAGTGGCTTGAAAGTCACTCTACCTGTCCTCTTTGCAGACACAAGGTTGAATTGGGGGACATCAATGTTGGCCCAAAACTTATATTTGATGGATGA 525 0.4305 MSKRLLVLIIVLSFFINVQSQETGENVPEMPETIHPSKGVVIAVLTVMFAISFFLLAYVKFCRNSPLQVLNRDISIQGLTGSGSRYSGIDKQVIEALPFFKFSSVKGSKQGLECAVCLSKFEDTEVLRLLPKCKHAFHMNCIDKWLESHSTCPLCRHKVELGDINVGPKLIFDG 174
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0726 174 Pfam Ring finger domain 113 156 IPR001841 -
Dere04g0726 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 21 166 - -
Dere04g0726 174 SMART ring_2 114 155 IPR001841 -
Dere04g0726 174 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Dere04g0726 174 CDD RING-H2_EL5-like 113 156 - -
Dere04g0726 174 SUPERFAMILY RING/U-box 93 161 - -
Dere04g0726 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 163 IPR013083 -
Dere04g0726 174 FunFam RING-H2 finger protein ATL43 89 163 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g0726 Dere-ChrDere04 7338623 7339147 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0726 26 163 C3H Transcription Factor Family AT2G20030 50.345 3.87e-49 161