Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere04g0726 | ATGAGCAAGCGTTTGCTAGTGTTGATTATAGTTCTTTCTTTCTTCATCAATGTCCAATCCCAAGAAACTGGAGAGAACGTGCCAGAGATGCCTGAAACTATCCACCCTAGTAAAGGGGTTGTTATAGCTGTCCTCACCGTTATGTTTGCCATATCATTTTTCCTACTTGCCTATGTAAAGTTCTGCAGAAACAGCCCTCTTCAAGTTCTGAACCGAGATATAAGCATTCAAGGACTAACAGGATCAGGGTCTAGATATTCCGGAATAGACAAACAAGTAATCGAAGCACTGCCGTTTTTCAAGTTCTCTTCAGTCAAGGGGTCGAAACAAGGCCTAGAATGTGCTGTTTGCCTGTCCAAGTTTGAAGACACTGAGGTTCTCAGGTTGCTGCCAAAGTGCAAGCATGCTTTCCACATGAATTGCATCGATAAGTGGCTTGAAAGTCACTCTACCTGTCCTCTTTGCAGACACAAGGTTGAATTGGGGGACATCAATGTTGGCCCAAAACTTATATTTGATGGATGA | 525 | 0.4305 | MSKRLLVLIIVLSFFINVQSQETGENVPEMPETIHPSKGVVIAVLTVMFAISFFLLAYVKFCRNSPLQVLNRDISIQGLTGSGSRYSGIDKQVIEALPFFKFSSVKGSKQGLECAVCLSKFEDTEVLRLLPKCKHAFHMNCIDKWLESHSTCPLCRHKVELGDINVGPKLIFDG | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere04g0726 | 174 | Pfam | Ring finger domain | 113 | 156 | IPR001841 | - | |
Dere04g0726 | 174 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 21 | 166 | - | - | |
Dere04g0726 | 174 | SMART | ring_2 | 114 | 155 | IPR001841 | - | |
Dere04g0726 | 174 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 156 | IPR001841 | - | |
Dere04g0726 | 174 | CDD | RING-H2_EL5-like | 113 | 156 | - | - | |
Dere04g0726 | 174 | SUPERFAMILY | RING/U-box | 93 | 161 | - | - | |
Dere04g0726 | 174 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 163 | IPR013083 | - | |
Dere04g0726 | 174 | FunFam | RING-H2 finger protein ATL43 | 89 | 163 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere04g0726 | Dere-ChrDere04 | 7338623 | 7339147 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere04g0726 | 26 | 163 | C3H Transcription Factor Family | AT2G20030 | 50.345 | 3.87e-49 | 161 |