Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere04g0725 | ATGGCGTCATCCTTATCAGCAGCTCTGAATCTCTCTACAGTTGCTGTACAATCACCACGCTTTATCATATTCCCCTCGATGAGACATTGCTGTTACAATCCTTCTCGAAGGCTCACTCTCTTTCACCTCGGAACCGCTTTCCCACAATCCCAGTTATTTGGTGCAAAAGTAACTGAGGTGAATAAAGCAGAGGGACAAGCAATAGAGGCTACTACTGCAGGAAAACTAGCCCAACCAAACATTGCTGTTAAACAAAATTTAATGGACTGGGTCAAAAATGACACTCGAAGATTGCTTCATGTTGTATACCGTGTAGGGGAGTTGGAGAAGACTATAAAGTTCTATACTGAATGCCTTGGTATGAAACTATTGAGAAAACGTGATATACCAGAAGAGAAATATACTAATGCTTTTCTTGGATACGGGCCTGAAGAGTCCCATTTTGTAGTTGAACTTACTTACAATTATGGAGTGGATAAGTATGACATTGGAACTGGTTTTGGTCATTTTGGACTTGCAGTTGAAGATGTTGCCAAGACTGTAGATCTAATAAAGGCTAAGGGGGGGAAGGTTACCAGGGAACCAGGACCTGTCAAAGGTGGCAGTACGGTTATTGCATTTGTTGAAGATCCTGATTGTTATAAGTTTGAGCTTCTTGAGAGAGGACCTAGTTCTGAACCTTTATGCCAAGTAATGCTTCGAGTAGGTGATCTTGATCGTGCCATAGCCTTCTATCAACAAGCTTTTGGCATGCAACTTCTCCGCAAAAGGGACAACCCTGAGTACAAGTATACAGTAGCCATGATGGGATATGGTCCTGAAGATAAGAATGCTGTGCTAGAACTGACATATAACTATGGGGTCACCAATTATGACAAAGGAGATGGTTATGCACAGATTGCAATAGGCACGAATGATGTCTATAAGACTGCGGAAGCAATAAAACTGTGTGGAGGGAAGATTATCCGTGAACCTGGCCCCCTGCCTGGAATCAACACCAAGATAGTAGTTTGCTTGGATCCTGATGGTTGGAAATCGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA | 1080 | 0.4204 | MASSLSAALNLSTVAVQSPRFIIFPSMRHCCYNPSRRLTLFHLGTAFPQSQLFGAKVTEVNKAEGQAIEATTAGKLAQPNIAVKQNLMDWVKNDTRRLLHVVYRVGELEKTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEESHFVVELTYNYGVDKYDIGTGFGHFGLAVEDVAKTVDLIKAKGGKVTREPGPVKGGSTVIAFVEDPDCYKFELLERGPSSEPLCQVMLRVGDLDRAIAFYQQAFGMQLLRKRDNPEYKYTVAMMGYGPEDKNAVLELTYNYGVTNYDKGDGYAQIAIGTNDVYKTAEAIKLCGGKIIREPGPLPGINTKIVVCLDPDGWKSVFVDNVDFLKELE | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere04g0725 | 359 | ProSitePatterns | Glyoxalase I signature 1. | 230 | 251 | IPR018146 | GO:0004462|GO:0046872 | |
| Dere04g0725 | 359 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 96 | 226 | IPR029068 | - | |
| Dere04g0725 | 359 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 228 | 349 | IPR029068 | - | |
| Dere04g0725 | 359 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 227 | 351 | IPR037523 | - | |
| Dere04g0725 | 359 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 97 | 221 | IPR037523 | - | |
| Dere04g0725 | 359 | CDD | GlxI_Ni | 98 | 219 | - | - | |
| Dere04g0725 | 359 | Gene3D | - | 224 | 359 | IPR029068 | - | |
| Dere04g0725 | 359 | ProSitePatterns | Glyoxalase I signature 1. | 100 | 121 | IPR018146 | GO:0004462|GO:0046872 | |
| Dere04g0725 | 359 | ProSitePatterns | Glyoxalase I signature 2. | 164 | 176 | IPR018146 | GO:0004462|GO:0046872 | |
| Dere04g0725 | 359 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 230 | 345 | IPR004360 | - | |
| Dere04g0725 | 359 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 98 | 218 | IPR004360 | - | |
| Dere04g0725 | 359 | PANTHER | LACTOYLGLUTATHIONE LYASE | 81 | 359 | - | - | |
| Dere04g0725 | 359 | Gene3D | - | 72 | 222 | IPR029068 | - | |
| Dere04g0725 | 359 | FunFam | Lactoylglutathione lyase | 224 | 359 | - | - | |
| Dere04g0725 | 359 | NCBIfam | lactoylglutathione lyase | 97 | 222 | IPR004361 | GO:0004462|GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere04g0725 | Dere-ChrDere04 | 7323243 | 7327528 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere04g0725 | 230 | 348 | Calmodulin-binding Proteins | AT1G08110 | 26.897 | 5.55e-10 | 57.4 |